2017-09-10 02:45:04,961 INFO     quick_adcp   importing numpy version 1.8.2
2017-09-10 02:45:04,970 INFO     quick_adcp   importing matplotlib version 1.4.3
2017-09-10 02:45:05,075 INFO     quick_adcp   =====================================================
2017-09-10 02:45:05,075 INFO     quick_adcp   =====================================================
2017-09-10 02:45:05,075 INFO     quick_adcp   command line was: /usr/local/currents/bin/run_quick.py -d wh300
2017-09-10 02:45:05,076 INFO     quick_adcp   cwd is /home/data/EX1708_1/proc/wh300
about to run these steps:
 - write_clearflags
 - scandata
 - avg_and_load
 - codaseditsetup
 - setflags
 - getnav
 - lst_hdg
 - plot_headcorr
 - navsteps
 - find_pflags
 - apply_edit
 - navsteps
 - lst_temp
 - plot_temp
 - lst_npings
 - calib
 - matfiles
 - adcpsect
 - refabs
 - smoothnav
 - putnav
 - refplots
 - find_pflags
 - codaseditsetup
2017-09-10 02:45:05,079 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:05,079 INFO     quick_adcp   step 1: set up files in "edit" directory 

2017-09-10 02:45:05,079 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:05,080 INFO     quick_adcp   step 2: scan files for time range

2017-09-10 02:45:05,092 INFO     quick_adcp   looking for database with adcpdb/a_ex*.blk
2017-09-10 02:45:05,092 INFO     quick_adcp   database found: listing blocks
2017-09-10 02:45:05,100 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:05,100 INFO     quick_adcp   step 3: generate averaged data...
2017-09-10 02:45:05,122 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:05,122 INFO     quick_adcp   step 4: load averaged data (to database)
2017-09-10 02:45:05,143 INFO     quick_adcp   database time range:
2017-09-10 02:45:05,143 INFO     quick_adcp   2017/09/07  16:00:39 to 2017/09/10  02:44:01
2017-09-10 02:45:05,143 INFO     quick_adcp   (249.667118 to 252.113900)
2017-09-10 02:45:05,149 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:05,150 INFO     quick_adcp   step 5: set up files for codas editing (gautoedit.py)

2017-09-10 02:45:05,150 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:05,150 INFO     quick_adcp   step 6: run setflags?

2017-09-10 02:45:05,167 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:05,168 INFO     quick_adcp   step 7: get navigation

2017-09-10 02:45:05,403 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:05,403 INFO     quick_adcp   step 8: list heading

2017-09-10 02:45:05,413 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:05,413 INFO     quick_adcp   step 9: plot heading correction

2017-09-10 02:45:05,635 INFO     quick_adcp   
-------------------------
2017-09-10 02:45:05,635 INFO     quick_adcp   ---- running navsteps ---
2017-09-10 02:45:05,635 INFO     quick_adcp   -------------------------
2017-09-10 02:45:05,635 INFO     quick_adcp   step 10: nav steps: run adcpsect
2017-09-10 02:45:05,635 INFO     quick_adcp   navstep 1
2017-09-10 02:45:05,649 INFO     quick_adcp   -------------------------
2017-09-10 02:45:05,649 INFO     quick_adcp   step 11: nav steps: run refabs
2017-09-10 02:45:05,649 INFO     quick_adcp   navstep 2
2017-09-10 02:45:05,659 INFO     quick_adcp   -------------------------
2017-09-10 02:45:05,660 INFO     quick_adcp   step 12: nav steps: run smoothr for plots
2017-09-10 02:45:05,660 INFO     quick_adcp   navstep 3
2017-09-10 02:45:05,704 INFO     quick_adcp   -------------------------
2017-09-10 02:45:05,704 INFO     quick_adcp   step 13: nav steps: smooth navigation for velocities
2017-09-10 02:45:05,704 INFO     quick_adcp   navstep 4
2017-09-10 02:45:05,744 INFO     quick_adcp   -------------------------
2017-09-10 02:45:05,744 INFO     quick_adcp   step 14: nav steps: put positions and uvship from refsm into codasdb 
2017-09-10 02:45:05,745 INFO     quick_adcp   navstep 5
2017-09-10 02:45:05,941 INFO     quick_adcp   -------------------------
2017-09-10 02:45:05,941 INFO     quick_adcp   step 15: nav steps: make reflayer plots
2017-09-10 02:45:05,941 INFO     quick_adcp   navstep 6
2017-09-10 02:45:06,382 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:06,382 INFO     quick_adcp   step 10: find profile flags 

2017-09-10 02:45:06,431 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:06,431 INFO     quick_adcp   step 11: apply editing 

2017-09-10 02:45:06,457 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:06,457 INFO     quick_adcp   step 12: run calibration steps 

2017-09-10 02:45:06,543 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:06,543 INFO     quick_adcp   step 13: extract and plot temperature 

2017-09-10 02:45:06,696 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:06,696 INFO     quick_adcp   step 14: extract and plot number of pings per ensemble 

2017-09-10 02:45:06,802 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:06,803 INFO     quick_adcp   step 15: extract matlab "allbins" 

2017-09-10 02:45:06,888 INFO     quick_adcp   ---------------------------------------------
2017-09-10 02:45:06,888 INFO     quick_adcp   writing "cruise_info.txt"