2017-03-26 21:27:44,291 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:27:30 2017-03-26 21:28:34,425 INFO repeater task wh300_10pings starting 4.3 seconds late 2017-03-26 21:28:34,545 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:29:34,702 INFO repeater task wh300_quick starting 4.6 seconds late 2017-03-26 21:29:39,864 INFO repeater task wh300_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:29:39,864 INFO repeater task wh300_quick ended after 5.2 seconds 2017-03-26 21:29:39,864 INFO repeater task wh300_3dayplots starting 9.7 seconds late 2017-03-26 21:29:53,029 INFO repeater task wh300_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:29:53,029 INFO repeater task wh300_3dayplots ended after 13.2 seconds 2017-03-26 21:29:53,029 INFO repeater task wh300_tsstats starting 22.9 seconds late 2017-03-26 21:29:53,756 INFO repeater task wh300_tsstats ended after 0.7 seconds 2017-03-26 21:29:53,756 INFO repeater task os38bb_lastensq starting 9.8 seconds late 2017-03-26 21:29:54,994 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 21:29:54,994 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 21:29:54,995 INFO repeater task os38bb_lastensq ended after 1.2 seconds 2017-03-26 21:29:54,995 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 21:29:34 2017-03-26 21:29:54,996 INFO repeater task os38bb_quick starting 24.8 seconds late 2017-03-26 21:29:58,566 INFO repeater task os38bb_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:29:58,567 INFO repeater task os38bb_quick ended after 3.6 seconds 2017-03-26 21:29:58,567 INFO repeater task os38bb_3dayplots starting 28.4 seconds late 2017-03-26 21:30:11,658 INFO repeater task os38bb_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:30:11,658 INFO repeater task os38bb_3dayplots ended after 13.1 seconds 2017-03-26 21:30:11,659 INFO repeater task os38bb_tsstats starting 41.5 seconds late 2017-03-26 21:30:12,302 INFO repeater task os38bb_tsstats ended after 0.6 seconds 2017-03-26 21:30:12,302 INFO repeater task os38nb_lastensq starting 28.3 seconds late 2017-03-26 21:30:13,675 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:30:13,675 INFO repeater task os38nb_lastensq ended after 1.4 seconds 2017-03-26 21:30:13,675 INFO repeater task os38nb_lastensq: Time from /home/data/EX1703_01/proc/os38nb/load/wrote_ens_time: 2017/03/26 21:29:34 2017-03-26 21:30:13,675 INFO repeater task os38nb_10pings starting 3.5 seconds late 2017-03-26 21:30:13,780 INFO repeater task os38nb_10pings ended after 0.1 seconds 2017-03-26 21:30:13,780 INFO repeater task os38nb_quick starting 43.6 seconds late 2017-03-26 21:30:17,251 INFO repeater task os38nb_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:30:17,251 INFO repeater task os38nb_quick ended after 3.5 seconds 2017-03-26 21:30:17,252 INFO repeater task os38nb_3dayplots starting 47.1 seconds late 2017-03-26 21:30:30,511 INFO repeater task os38nb_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:30:30,511 INFO repeater task os38nb_3dayplots ended after 13.3 seconds 2017-03-26 21:30:30,511 INFO repeater task os38nb_tsstats starting 60.4 seconds late 2017-03-26 21:30:31,091 INFO repeater task os38nb_tsstats ended after 0.6 seconds 2017-03-26 21:30:31,092 INFO repeater task wh300_beamplots starting 60.9 seconds late 2017-03-26 21:30:32,112 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:30:32,112 INFO repeater task wh300_beamplots ended after 1.0 seconds 2017-03-26 21:30:32,112 INFO repeater task wh300_beamplots starting 62.0 seconds late 2017-03-26 21:30:33,053 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:30:33,053 INFO repeater task wh300_beamplots ended after 0.9 seconds 2017-03-26 21:30:33,053 INFO repeater task os38bb_beamplots starting 62.9 seconds late 2017-03-26 21:30:33,919 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:30:33,919 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2017-03-26 21:30:33,919 INFO repeater task os38bb_beamplots starting 63.8 seconds late 2017-03-26 21:30:34,801 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:30:34,801 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2017-03-26 21:30:34,801 INFO repeater task os38nb_beamplots starting 64.7 seconds late 2017-03-26 21:30:35,655 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:30:35,655 INFO repeater task os38nb_beamplots ended after 0.9 seconds 2017-03-26 21:30:35,655 INFO repeater task os38nb_beamplots starting 65.5 seconds late 2017-03-26 21:30:36,558 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:30:36,559 INFO repeater task os38nb_beamplots ended after 0.9 seconds 2017-03-26 21:30:36,559 INFO repeater task posmv_hcorrstats starting 66.4 seconds late 2017-03-26 21:30:38,667 INFO repeater task posmv_hcorrstats ended after 2.1 seconds 2017-03-26 21:30:38,667 INFO repeater task posmv_plotposmv starting 68.5 seconds late 2017-03-26 21:30:40,266 INFO repeater task posmv_plotposmv ended after 1.6 seconds 2017-03-26 21:30:45,272 INFO repeater task wh300_lastensq starting 65.3 seconds late 2017-03-26 21:30:47,340 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:30:47,340 INFO repeater task wh300_lastensq ended after 2.1 seconds 2017-03-26 21:30:47,340 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:29:30 2017-03-26 21:30:47,341 INFO repeater task os38bb_10pings starting 37.2 seconds late 2017-03-26 21:30:47,449 INFO repeater task os38bb_10pings ended after 0.1 seconds 2017-03-26 21:30:52,456 INFO repeater task wh300_10pings starting 2.3 seconds late 2017-03-26 21:30:52,568 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:31:42,687 INFO repeater task wh300_lastensq starting 2.7 seconds late 2017-03-26 21:31:44,627 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:31:44,627 INFO repeater task wh300_lastensq ended after 1.9 seconds 2017-03-26 21:31:44,627 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:31:30 2017-03-26 21:33:14,862 INFO repeater task wh300_10pings starting 4.7 seconds late 2017-03-26 21:33:14,981 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:33:40,046 INFO repeater task wh300_lastensq starting 0.0 seconds late 2017-03-26 21:33:42,028 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:33:42,029 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 21:33:42,029 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:33:30 2017-03-26 21:34:32,165 INFO repeater task posmv_hcorrstats starting 2.0 seconds late 2017-03-26 21:34:34,266 INFO repeater task posmv_hcorrstats ended after 2.1 seconds 2017-03-26 21:34:34,267 INFO repeater task posmv_plotposmv starting 4.1 seconds late 2017-03-26 21:34:35,861 INFO repeater task posmv_plotposmv ended after 1.6 seconds 2017-03-26 21:34:45,885 INFO repeater task os38bb_lastensq starting 1.9 seconds late 2017-03-26 21:34:47,125 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 21:34:47,125 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 21:34:47,125 INFO repeater task os38bb_lastensq ended after 1.2 seconds 2017-03-26 21:34:47,125 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 21:34:34 2017-03-26 21:34:47,126 INFO repeater task os38nb_lastensq starting 3.1 seconds late 2017-03-26 21:34:48,660 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:34:48,660 INFO repeater task os38nb_lastensq ended after 1.5 seconds 2017-03-26 21:34:48,660 INFO repeater task os38nb_lastensq: Time from /home/data/EX1703_01/proc/os38nb/load/wrote_ens_time: 2017/03/26 21:34:34 2017-03-26 21:35:33,761 INFO repeater task wh300_10pings starting 3.6 seconds late 2017-03-26 21:35:33,882 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:35:33,883 INFO repeater task os38bb_10pings starting 3.7 seconds late 2017-03-26 21:35:33,983 INFO repeater task os38bb_10pings ended after 0.1 seconds 2017-03-26 21:35:33,984 INFO repeater task os38nb_10pings starting 3.8 seconds late 2017-03-26 21:35:34,084 INFO repeater task os38nb_10pings ended after 0.1 seconds 2017-03-26 21:35:44,106 INFO repeater task wh300_lastensq starting 4.1 seconds late 2017-03-26 21:35:46,051 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:35:46,051 INFO repeater task wh300_lastensq ended after 1.9 seconds 2017-03-26 21:35:46,051 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:35:30 2017-03-26 21:37:41,362 INFO repeater task wh300_lastensq starting 1.4 seconds late 2017-03-26 21:37:43,358 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:37:43,358 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 21:37:43,358 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:37:30 2017-03-26 21:37:53,372 INFO repeater task wh300_10pings starting 3.2 seconds late 2017-03-26 21:37:53,485 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:39:33,642 INFO repeater task posmv_hcorrstats starting 3.5 seconds late 2017-03-26 21:39:35,703 INFO repeater task posmv_hcorrstats ended after 2.1 seconds 2017-03-26 21:39:35,703 INFO repeater task posmv_plotposmv starting 5.6 seconds late 2017-03-26 21:39:37,317 INFO repeater task posmv_plotposmv ended after 1.6 seconds 2017-03-26 21:39:42,319 INFO repeater task wh300_lastensq starting 2.3 seconds late 2017-03-26 21:39:44,347 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:39:44,347 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 21:39:44,347 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:39:30 2017-03-26 21:39:44,348 INFO repeater task os38bb_lastensq starting 0.3 seconds late 2017-03-26 21:39:45,591 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 21:39:45,591 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 21:39:45,592 INFO repeater task os38bb_lastensq ended after 1.2 seconds 2017-03-26 21:39:45,592 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 21:39:34 2017-03-26 21:39:45,592 INFO repeater task os38nb_lastensq starting 1.6 seconds late 2017-03-26 21:39:46,994 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:39:46,994 INFO repeater task os38nb_lastensq ended after 1.4 seconds 2017-03-26 21:39:46,994 INFO repeater task os38nb_lastensq: Time from /home/data/EX1703_01/proc/os38nb/load/wrote_ens_time: 2017/03/26 21:39:34 2017-03-26 21:40:12,041 INFO repeater task wh300_10pings starting 1.9 seconds late 2017-03-26 21:40:12,151 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:40:52,253 INFO repeater task os38bb_10pings starting 2.1 seconds late 2017-03-26 21:40:52,366 INFO repeater task os38bb_10pings ended after 0.1 seconds 2017-03-26 21:40:52,367 INFO repeater task os38nb_10pings starting 2.2 seconds late 2017-03-26 21:40:52,470 INFO repeater task os38nb_10pings ended after 0.1 seconds 2017-03-26 21:41:42,609 INFO repeater task wh300_lastensq starting 2.6 seconds late 2017-03-26 21:41:44,648 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:41:44,648 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 21:41:44,649 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:41:30 2017-03-26 21:42:34,744 INFO repeater task wh300_10pings starting 4.6 seconds late 2017-03-26 21:42:34,857 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:43:44,956 INFO repeater task wh300_lastensq starting 5.0 seconds late 2017-03-26 21:43:47,009 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:43:47,009 INFO repeater task wh300_lastensq ended after 2.1 seconds 2017-03-26 21:43:47,009 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:43:30 2017-03-26 21:44:32,110 INFO repeater task wh300_quick starting 2.0 seconds late 2017-03-26 21:44:37,306 INFO repeater task wh300_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:44:37,306 INFO repeater task wh300_quick ended after 5.2 seconds 2017-03-26 21:44:37,307 INFO repeater task wh300_3dayplots starting 7.2 seconds late 2017-03-26 21:44:50,422 INFO repeater task wh300_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:44:50,422 INFO repeater task wh300_3dayplots ended after 13.1 seconds 2017-03-26 21:44:50,423 INFO repeater task wh300_tsstats starting 20.3 seconds late 2017-03-26 21:44:51,174 INFO repeater task wh300_tsstats ended after 0.8 seconds 2017-03-26 21:44:51,174 INFO repeater task os38bb_lastensq starting 7.2 seconds late 2017-03-26 21:44:52,467 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 21:44:52,467 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 21:44:52,467 INFO repeater task os38bb_lastensq ended after 1.3 seconds 2017-03-26 21:44:52,468 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 21:44:34 2017-03-26 21:44:52,468 INFO repeater task os38bb_quick starting 22.3 seconds late 2017-03-26 21:44:56,037 INFO repeater task os38bb_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:44:56,038 INFO repeater task os38bb_quick ended after 3.6 seconds 2017-03-26 21:44:56,038 INFO repeater task os38bb_3dayplots starting 25.9 seconds late 2017-03-26 21:45:09,133 INFO repeater task os38bb_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:45:09,133 INFO repeater task os38bb_3dayplots ended after 13.1 seconds 2017-03-26 21:45:09,133 INFO repeater task os38bb_tsstats starting 39.0 seconds late 2017-03-26 21:45:09,742 INFO repeater task os38bb_tsstats ended after 0.6 seconds 2017-03-26 21:45:09,742 INFO repeater task os38nb_lastensq starting 25.7 seconds late 2017-03-26 21:45:11,266 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:45:11,266 INFO repeater task os38nb_lastensq ended after 1.5 seconds 2017-03-26 21:45:11,267 INFO repeater task os38nb_lastensq: Time from /home/data/EX1703_01/proc/os38nb/load/wrote_ens_time: 2017/03/26 21:44:34 2017-03-26 21:45:11,267 INFO repeater task os38nb_quick starting 41.1 seconds late 2017-03-26 21:45:14,672 INFO repeater task os38nb_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:45:14,673 INFO repeater task os38nb_quick ended after 3.4 seconds 2017-03-26 21:45:14,673 INFO repeater task os38nb_3dayplots starting 44.5 seconds late 2017-03-26 21:45:28,038 INFO repeater task os38nb_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:45:28,038 INFO repeater task os38nb_3dayplots ended after 13.4 seconds 2017-03-26 21:45:28,038 INFO repeater task os38nb_tsstats starting 57.9 seconds late 2017-03-26 21:45:28,630 INFO repeater task os38nb_tsstats ended after 0.6 seconds 2017-03-26 21:45:28,630 INFO repeater task wh300_beamplots starting 58.5 seconds late 2017-03-26 21:45:29,579 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:45:29,580 INFO repeater task wh300_beamplots ended after 0.9 seconds 2017-03-26 21:45:29,580 INFO repeater task wh300_beamplots starting 59.4 seconds late 2017-03-26 21:45:30,567 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:45:30,567 INFO repeater task wh300_beamplots ended after 1.0 seconds 2017-03-26 21:45:30,567 INFO repeater task os38bb_beamplots starting 60.4 seconds late 2017-03-26 21:45:31,474 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:45:31,474 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2017-03-26 21:45:31,474 INFO repeater task os38bb_beamplots starting 61.3 seconds late 2017-03-26 21:45:32,344 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:45:32,344 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2017-03-26 21:45:32,345 INFO repeater task os38nb_beamplots starting 62.2 seconds late 2017-03-26 21:45:33,201 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:45:33,201 INFO repeater task os38nb_beamplots ended after 0.9 seconds 2017-03-26 21:45:33,201 INFO repeater task os38nb_beamplots starting 63.1 seconds late 2017-03-26 21:45:34,080 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 21:45:34,080 INFO repeater task os38nb_beamplots ended after 0.9 seconds 2017-03-26 21:45:34,080 INFO repeater task posmv_hcorrstats starting 63.9 seconds late 2017-03-26 21:45:36,095 INFO repeater task posmv_hcorrstats ended after 2.0 seconds 2017-03-26 21:45:36,096 INFO repeater task posmv_plotposmv starting 65.9 seconds late 2017-03-26 21:45:37,705 INFO repeater task posmv_plotposmv ended after 1.6 seconds 2017-03-26 21:45:42,711 INFO repeater task wh300_lastensq starting 2.7 seconds late 2017-03-26 21:45:44,682 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:45:44,682 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 21:45:44,682 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:45:30 2017-03-26 21:45:44,682 INFO repeater task wh300_10pings starting 54.5 seconds late 2017-03-26 21:45:44,785 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:46:14,867 INFO repeater task os38bb_10pings starting 4.7 seconds late 2017-03-26 21:46:14,986 INFO repeater task os38bb_10pings ended after 0.1 seconds 2017-03-26 21:46:14,987 INFO repeater task os38nb_10pings starting 4.8 seconds late 2017-03-26 21:46:15,090 INFO repeater task os38nb_10pings ended after 0.1 seconds 2017-03-26 21:47:10,232 INFO repeater task wh300_10pings starting 0.1 seconds late 2017-03-26 21:47:10,350 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:47:40,431 INFO repeater task wh300_lastensq starting 0.4 seconds late 2017-03-26 21:47:42,569 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:47:42,569 INFO repeater task wh300_lastensq ended after 2.1 seconds 2017-03-26 21:47:42,570 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:47:30 2017-03-26 21:49:32,874 INFO repeater task wh300_10pings starting 2.7 seconds late 2017-03-26 21:49:32,990 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:49:32,997 INFO repeater task posmv_hcorrstats starting 2.8 seconds late 2017-03-26 21:49:34,908 INFO repeater task posmv_hcorrstats ended after 1.9 seconds 2017-03-26 21:49:34,908 INFO repeater task posmv_plotposmv starting 4.8 seconds late 2017-03-26 21:49:36,553 INFO repeater task posmv_plotposmv ended after 1.6 seconds 2017-03-26 21:49:41,558 INFO repeater task wh300_lastensq starting 1.6 seconds late 2017-03-26 21:49:43,562 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:49:43,562 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 21:49:43,562 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:49:30 2017-03-26 21:49:48,571 INFO repeater task os38bb_lastensq starting 4.6 seconds late 2017-03-26 21:49:49,839 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 21:49:49,840 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 21:49:49,840 INFO repeater task os38bb_lastensq ended after 1.3 seconds 2017-03-26 21:49:49,840 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 21:49:34 2017-03-26 21:49:49,841 INFO repeater task os38nb_lastensq starting 5.8 seconds late 2017-03-26 21:49:51,303 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:49:51,303 INFO repeater task os38nb_lastensq ended after 1.5 seconds 2017-03-26 21:49:51,303 INFO repeater task os38nb_lastensq: Time from /home/data/EX1703_01/proc/os38nb/load/wrote_ens_time: 2017/03/26 21:49:34 2017-03-26 21:51:31,476 INFO repeater task os38bb_10pings starting 1.3 seconds late 2017-03-26 21:51:31,599 INFO repeater task os38bb_10pings ended after 0.1 seconds 2017-03-26 21:51:31,600 INFO repeater task os38nb_10pings starting 1.5 seconds late 2017-03-26 21:51:31,718 INFO repeater task os38nb_10pings ended after 0.1 seconds 2017-03-26 21:51:41,732 INFO repeater task wh300_lastensq starting 1.7 seconds late 2017-03-26 21:51:43,835 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:51:43,835 INFO repeater task wh300_lastensq ended after 2.1 seconds 2017-03-26 21:51:43,836 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:51:30 2017-03-26 21:51:53,860 INFO repeater task wh300_10pings starting 3.7 seconds late 2017-03-26 21:51:53,972 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:53:44,256 INFO repeater task wh300_lastensq starting 4.3 seconds late 2017-03-26 21:53:46,194 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:53:46,195 INFO repeater task wh300_lastensq ended after 1.9 seconds 2017-03-26 21:53:46,195 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:53:30 2017-03-26 21:54:11,260 INFO repeater task wh300_10pings starting 1.1 seconds late 2017-03-26 21:54:11,377 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:54:31,435 INFO repeater task posmv_hcorrstats starting 1.3 seconds late 2017-03-26 21:54:33,428 INFO repeater task posmv_hcorrstats ended after 2.0 seconds 2017-03-26 21:54:33,428 INFO repeater task posmv_plotposmv starting 3.3 seconds late 2017-03-26 21:54:35,051 INFO repeater task posmv_plotposmv ended after 1.6 seconds 2017-03-26 21:54:45,072 INFO repeater task os38bb_lastensq starting 1.1 seconds late 2017-03-26 21:54:46,357 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 21:54:46,357 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 21:54:46,358 INFO repeater task os38bb_lastensq ended after 1.3 seconds 2017-03-26 21:54:46,358 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 21:54:34 2017-03-26 21:54:46,358 INFO repeater task os38nb_lastensq starting 2.4 seconds late 2017-03-26 21:54:47,856 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:54:47,856 INFO repeater task os38nb_lastensq ended after 1.5 seconds 2017-03-26 21:54:47,856 INFO repeater task os38nb_lastensq: Time from /home/data/EX1703_01/proc/os38nb/load/wrote_ens_time: 2017/03/26 21:54:34 2017-03-26 21:55:42,942 INFO repeater task wh300_lastensq starting 2.9 seconds late 2017-03-26 21:55:45,039 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:55:45,039 INFO repeater task wh300_lastensq ended after 2.1 seconds 2017-03-26 21:55:45,039 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:55:30 2017-03-26 21:56:30,165 INFO repeater task wh300_10pings starting 0.0 seconds late 2017-03-26 21:56:30,278 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:56:50,328 INFO repeater task os38bb_10pings starting 0.2 seconds late 2017-03-26 21:56:50,445 INFO repeater task os38bb_10pings ended after 0.1 seconds 2017-03-26 21:56:50,446 INFO repeater task os38nb_10pings starting 0.3 seconds late 2017-03-26 21:56:50,554 INFO repeater task os38nb_10pings ended after 0.1 seconds 2017-03-26 21:57:40,676 INFO repeater task wh300_lastensq starting 0.7 seconds late 2017-03-26 21:57:42,627 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 21:57:42,627 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 21:57:42,627 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:57:30 2017-03-26 21:58:52,810 INFO repeater task wh300_10pings starting 2.7 seconds late 2017-03-26 21:58:52,928 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 21:59:33,034 INFO repeater task wh300_quick starting 2.9 seconds late 2017-03-26 21:59:38,256 INFO repeater task wh300_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:59:38,256 INFO repeater task wh300_quick ended after 5.2 seconds 2017-03-26 21:59:38,256 INFO repeater task wh300_3dayplots starting 8.1 seconds late 2017-03-26 21:59:51,400 INFO repeater task wh300_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:59:51,400 INFO repeater task wh300_3dayplots ended after 13.1 seconds 2017-03-26 21:59:51,400 INFO repeater task wh300_tsstats starting 21.3 seconds late 2017-03-26 21:59:52,116 INFO repeater task wh300_tsstats ended after 0.7 seconds 2017-03-26 21:59:52,116 INFO repeater task os38bb_lastensq starting 8.1 seconds late 2017-03-26 21:59:53,386 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 21:59:53,386 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 21:59:53,387 INFO repeater task os38bb_lastensq ended after 1.3 seconds 2017-03-26 21:59:53,387 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 21:59:34 2017-03-26 21:59:53,387 INFO repeater task os38bb_quick starting 23.2 seconds late 2017-03-26 21:59:56,892 INFO repeater task os38bb_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 21:59:56,892 INFO repeater task os38bb_quick ended after 3.5 seconds 2017-03-26 21:59:56,893 INFO repeater task os38bb_3dayplots starting 26.7 seconds late 2017-03-26 22:00:10,223 INFO repeater task os38bb_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 22:00:10,223 INFO repeater task os38bb_3dayplots ended after 13.3 seconds 2017-03-26 22:00:10,223 INFO repeater task os38bb_tsstats starting 40.1 seconds late 2017-03-26 22:00:10,813 INFO repeater task os38bb_tsstats ended after 0.6 seconds 2017-03-26 22:00:10,814 INFO repeater task os38nb_lastensq starting 26.8 seconds late 2017-03-26 22:00:12,214 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:00:12,214 INFO repeater task os38nb_lastensq ended after 1.4 seconds 2017-03-26 22:00:12,215 INFO repeater task os38nb_lastensq: Time from /home/data/EX1703_01/proc/os38nb/load/wrote_ens_time: 2017/03/26 21:59:34 2017-03-26 22:00:12,215 INFO repeater task os38nb_quick starting 42.1 seconds late 2017-03-26 22:00:15,679 INFO repeater task os38nb_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 22:00:15,679 INFO repeater task os38nb_quick ended after 3.5 seconds 2017-03-26 22:00:15,680 INFO repeater task os38nb_3dayplots starting 45.5 seconds late 2017-03-26 22:00:28,949 INFO repeater task os38nb_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 22:00:28,949 INFO repeater task os38nb_3dayplots ended after 13.3 seconds 2017-03-26 22:00:28,950 INFO repeater task os38nb_tsstats starting 58.8 seconds late 2017-03-26 22:00:29,613 INFO repeater task os38nb_tsstats ended after 0.7 seconds 2017-03-26 22:00:29,613 INFO repeater task wh300_beamplots starting 59.5 seconds late 2017-03-26 22:00:30,540 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 22:00:30,541 INFO repeater task wh300_beamplots ended after 0.9 seconds 2017-03-26 22:00:30,541 INFO repeater task wh300_beamplots starting 60.4 seconds late 2017-03-26 22:00:31,464 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 22:00:31,464 INFO repeater task wh300_beamplots ended after 0.9 seconds 2017-03-26 22:00:31,464 INFO repeater task os38bb_beamplots starting 61.3 seconds late 2017-03-26 22:00:32,366 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 22:00:32,366 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2017-03-26 22:00:32,366 INFO repeater task os38bb_beamplots starting 62.2 seconds late 2017-03-26 22:00:33,247 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 22:00:33,247 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2017-03-26 22:00:33,247 INFO repeater task os38nb_beamplots starting 63.1 seconds late 2017-03-26 22:00:34,164 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 22:00:34,164 INFO repeater task os38nb_beamplots ended after 0.9 seconds 2017-03-26 22:00:34,165 INFO repeater task os38nb_beamplots starting 64.0 seconds late 2017-03-26 22:00:35,071 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2017-03-26 22:00:35,071 INFO repeater task os38nb_beamplots ended after 0.9 seconds 2017-03-26 22:00:35,071 INFO repeater task posmv_hcorrstats starting 64.9 seconds late 2017-03-26 22:00:37,773 INFO repeater task posmv_hcorrstats ended after 2.7 seconds 2017-03-26 22:00:37,773 INFO repeater task posmv_plotposmv starting 67.6 seconds late 2017-03-26 22:00:39,349 INFO repeater task posmv_plotposmv ended after 1.6 seconds 2017-03-26 22:00:44,355 INFO repeater task wh300_lastensq starting 64.4 seconds late 2017-03-26 22:00:46,388 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:00:46,389 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 22:00:46,389 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 21:59:30 2017-03-26 22:01:11,455 INFO repeater task wh300_10pings starting 1.3 seconds late 2017-03-26 22:01:11,567 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 22:01:41,649 INFO repeater task wh300_lastensq starting 1.6 seconds late 2017-03-26 22:01:43,615 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:01:43,615 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 22:01:43,615 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 22:01:30 2017-03-26 22:02:13,693 INFO repeater task os38bb_10pings starting 3.5 seconds late 2017-03-26 22:02:13,805 INFO repeater task os38bb_10pings ended after 0.1 seconds 2017-03-26 22:02:13,806 INFO repeater task os38nb_10pings starting 3.7 seconds late 2017-03-26 22:02:13,917 INFO repeater task os38nb_10pings ended after 0.1 seconds 2017-03-26 22:03:34,102 INFO repeater task wh300_10pings starting 4.0 seconds late 2017-03-26 22:03:34,218 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 22:03:44,236 INFO repeater task wh300_lastensq starting 4.2 seconds late 2017-03-26 22:03:46,345 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:03:46,345 INFO repeater task wh300_lastensq ended after 2.1 seconds 2017-03-26 22:03:46,345 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 22:03:30 2017-03-26 22:04:31,471 INFO repeater task posmv_hcorrstats starting 1.3 seconds late 2017-03-26 22:04:34,119 INFO repeater task posmv_hcorrstats ended after 2.6 seconds 2017-03-26 22:04:34,119 INFO repeater task posmv_plotposmv starting 4.0 seconds late 2017-03-26 22:04:35,729 INFO repeater task posmv_plotposmv ended after 1.6 seconds 2017-03-26 22:04:45,753 INFO repeater task os38bb_lastensq starting 1.8 seconds late 2017-03-26 22:04:47,063 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 22:04:47,064 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 22:04:47,064 INFO repeater task os38bb_lastensq ended after 1.3 seconds 2017-03-26 22:04:47,064 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 22:04:34 2017-03-26 22:04:47,065 INFO repeater task os38nb_lastensq starting 3.1 seconds late 2017-03-26 22:04:48,498 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:04:48,499 INFO repeater task os38nb_lastensq ended after 1.4 seconds 2017-03-26 22:04:48,499 INFO repeater task os38nb_lastensq: Time from /home/data/EX1703_01/proc/os38nb/load/wrote_ens_time: 2017/03/26 22:04:34 2017-03-26 22:05:43,662 INFO repeater task wh300_lastensq starting 3.7 seconds late 2017-03-26 22:05:45,820 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:05:45,820 INFO repeater task wh300_lastensq ended after 2.2 seconds 2017-03-26 22:05:45,820 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 22:05:30 2017-03-26 22:05:50,828 INFO repeater task wh300_10pings starting 0.7 seconds late 2017-03-26 22:05:50,935 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 22:07:31,078 INFO repeater task os38bb_10pings starting 0.9 seconds late 2017-03-26 22:07:31,190 INFO repeater task os38bb_10pings ended after 0.1 seconds 2017-03-26 22:07:31,191 INFO repeater task os38nb_10pings starting 1.0 seconds late 2017-03-26 22:07:31,303 INFO repeater task os38nb_10pings ended after 0.1 seconds 2017-03-26 22:07:41,320 INFO repeater task wh300_lastensq starting 1.3 seconds late 2017-03-26 22:07:43,310 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:07:43,310 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 22:07:43,310 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 22:07:30 2017-03-26 22:08:13,389 INFO repeater task wh300_10pings starting 3.2 seconds late 2017-03-26 22:08:13,502 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 22:09:33,739 INFO repeater task posmv_hcorrstats starting 3.6 seconds late 2017-03-26 22:09:36,328 INFO repeater task posmv_hcorrstats ended after 2.6 seconds 2017-03-26 22:09:36,328 INFO repeater task posmv_plotposmv starting 6.2 seconds late 2017-03-26 22:09:37,906 INFO repeater task posmv_plotposmv ended after 1.6 seconds 2017-03-26 22:09:42,912 INFO repeater task wh300_lastensq starting 2.9 seconds late 2017-03-26 22:09:44,896 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:09:44,896 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 22:09:44,896 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 22:09:30 2017-03-26 22:09:44,896 INFO repeater task os38bb_lastensq starting 0.9 seconds late 2017-03-26 22:09:46,136 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 22:09:46,136 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 22:09:46,137 INFO repeater task os38bb_lastensq ended after 1.2 seconds 2017-03-26 22:09:46,137 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 22:09:34 2017-03-26 22:09:46,137 INFO repeater task os38nb_lastensq starting 2.1 seconds late 2017-03-26 22:09:47,628 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:09:47,629 INFO repeater task os38nb_lastensq ended after 1.5 seconds 2017-03-26 22:09:47,629 INFO repeater task os38nb_lastensq: Time from /home/data/EX1703_01/proc/os38nb/load/wrote_ens_time: 2017/03/26 22:09:34 2017-03-26 22:10:32,745 INFO repeater task wh300_10pings starting 2.6 seconds late 2017-03-26 22:10:32,866 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 22:11:43,053 INFO repeater task wh300_lastensq starting 3.1 seconds late 2017-03-26 22:11:45,076 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:11:45,076 INFO repeater task wh300_lastensq ended after 2.0 seconds 2017-03-26 22:11:45,077 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 22:11:30 2017-03-26 22:12:50,253 INFO repeater task wh300_10pings starting 0.1 seconds late 2017-03-26 22:12:50,372 INFO repeater task wh300_10pings ended after 0.1 seconds 2017-03-26 22:12:50,373 INFO repeater task os38bb_10pings starting 0.2 seconds late 2017-03-26 22:12:50,481 INFO repeater task os38bb_10pings ended after 0.1 seconds 2017-03-26 22:12:50,482 INFO repeater task os38nb_10pings starting 0.3 seconds late 2017-03-26 22:12:50,585 INFO repeater task os38nb_10pings ended after 0.1 seconds 2017-03-26 22:13:40,722 INFO repeater task wh300_lastensq starting 0.7 seconds late 2017-03-26 22:13:42,846 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) 2017-03-26 22:13:42,846 INFO repeater task wh300_lastensq ended after 2.1 seconds 2017-03-26 22:13:42,846 INFO repeater task wh300_lastensq: Time from /home/data/EX1703_01/proc/wh300/load/wrote_ens_time: 2017/03/26 22:13:30 2017-03-26 22:14:32,919 INFO repeater task wh300_quick starting 2.8 seconds late 2017-03-26 22:14:38,144 INFO repeater task wh300_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 22:14:38,145 INFO repeater task wh300_quick ended after 5.2 seconds 2017-03-26 22:14:38,146 INFO repeater task wh300_3dayplots starting 8.0 seconds late 2017-03-26 22:14:51,269 INFO repeater task wh300_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 22:14:51,269 INFO repeater task wh300_3dayplots ended after 13.1 seconds 2017-03-26 22:14:51,270 INFO repeater task wh300_tsstats starting 21.1 seconds late 2017-03-26 22:14:52,003 INFO repeater task wh300_tsstats ended after 0.7 seconds 2017-03-26 22:14:52,004 INFO repeater task os38bb_lastensq starting 8.0 seconds late 2017-03-26 22:14:53,347 ERROR repeater task os38bb_lastensq returncode 24 2017-03-26 22:14:53,348 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 543 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 Traceback (most recent call last): File "/usr/lib/python2.7/logging/__init__.py", line 851, in emit msg = self.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 724, in format return fmt.format(record) File "/usr/lib/python2.7/logging/__init__.py", line 464, in format record.message = record.getMessage() File "/usr/lib/python2.7/logging/__init__.py", line 328, in getMessage msg = msg % self.args TypeError: not all arguments converted during string formatting Logged from file ensplot.py, line 544 In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 518, in plot_vecprof_ktvec self.plot_vecprof(fig=fig, ax=ax[0], zbin=zbin) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 539, in plot_vecprof stats1 = binstats(zgood, ugood, segends=zgood[sl], avgtype='mean') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/binstats.py", line 53, in binstats raise ValueError("segends must be abcissa points") ValueError: segends must be abcissa points 2017-03-26 22:14:53,348 INFO repeater task os38bb_lastensq ended after 1.3 seconds 2017-03-26 22:14:53,348 INFO repeater task os38bb_lastensq: Time from /home/data/EX1703_01/proc/os38bb/load/wrote_ens_time: 2017/03/26 22:14:34 2017-03-26 22:14:53,348 INFO repeater task os38bb_quick starting 23.2 seconds late 2017-03-26 22:14:56,787 INFO repeater task os38bb_quick output: ===> could not apply jittery mask Traceback (most recent call last): File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/pingedit.py", line 768, in get_flags self.cflags.addmask(newmask, 'jittery') File "/usr/local/lib/python2.7/dist-packages/pycurrents/num/nptools.py", line 224, in addmask if mask.itemsize == self.nbytes: AttributeError: 'bool' object has no attribute 'itemsize' /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning) 2017-03-26 22:14:56,787 INFO repeater task os38bb_quick ended after 3.4 seconds 2017-03-26 22:14:56,788 INFO repeater task os38bb_3dayplots starting 26.6 seconds late 2017-03-26 22:15:10,029 INFO repeater task os38bb_3dayplots output: /usr/lib/python2.7/dist-packages/pkg_resources.py:1031: UserWarning: /home/adcp/.python-eggs is writable by group/others and vulnerable to attack when used with get_resource_filename. Consider a more secure location (set with .set_extraction_path or the PYTHON_EGG_CACHE environment variable). warnings.warn(msg, UserWarning)