2016-12-04 02:36:23,180 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:36:23,180 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:36:23,180 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:36:10 2016-12-04 02:36:53,269 INFO repeater task wh300_10pings starting 3.2 seconds late 2016-12-04 02:36:53,381 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:37:13,434 INFO repeater task posmv_hcorrstats starting 3.4 seconds late 2016-12-04 02:37:14,073 INFO repeater task posmv_hcorrstats ended after 0.6 seconds 2016-12-04 02:37:14,073 INFO repeater task posmv_plotposmv starting 4.0 seconds late 2016-12-04 02:37:14,487 INFO repeater task posmv_plotposmv ended after 0.4 seconds 2016-12-04 02:37:24,509 INFO repeater task os38bb_lastensq starting 4.5 seconds late 2016-12-04 02:37:25,641 ERROR repeater task os38bb_lastensq returncode 24 2016-12-04 02:37:25,641 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:37:25,641 INFO repeater task os38bb_lastensq ended after 1.1 seconds 2016-12-04 02:37:25,641 INFO repeater task os38bb_lastensq: Time from /home/data/EX1608_01/proc/os38bb/load/wrote_ens_time: 2016/12/04 02:37:14 2016-12-04 02:37:25,642 INFO repeater task os38nb_lastensq starting 5.6 seconds late 2016-12-04 02:37:26,782 ERROR repeater task os38nb_lastensq returncode 24 2016-12-04 02:37:26,782 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:37:26,783 INFO repeater task os38nb_lastensq ended after 1.1 seconds 2016-12-04 02:37:26,783 INFO repeater task os38nb_lastensq: Time from /home/data/EX1608_01/proc/os38nb/load/wrote_ens_time: 2016/12/04 02:37:14 2016-12-04 02:37:31,793 INFO repeater task os38bb_10pings starting 1.8 seconds late 2016-12-04 02:37:31,908 INFO repeater task os38bb_10pings ended after 0.1 seconds 2016-12-04 02:37:31,909 INFO repeater task os38nb_10pings starting 1.9 seconds late 2016-12-04 02:37:32,017 INFO repeater task os38nb_10pings ended after 0.1 seconds 2016-12-04 02:38:22,149 INFO repeater task wh300_lastensq starting 2.1 seconds late 2016-12-04 02:38:23,345 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:38:23,345 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:38:23,345 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:38:23,345 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:38:10 2016-12-04 02:39:13,467 INFO repeater task wh300_10pings starting 3.4 seconds late 2016-12-04 02:39:13,581 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:40:23,767 INFO repeater task wh300_lastensq starting 3.8 seconds late 2016-12-04 02:40:25,012 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:40:25,012 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:40:25,012 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:40:25,013 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:40:10 2016-12-04 02:41:30,194 INFO repeater task wh300_10pings starting 0.2 seconds late 2016-12-04 02:41:30,312 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:42:10,425 INFO repeater task posmv_hcorrstats starting 0.4 seconds late 2016-12-04 02:42:11,133 INFO repeater task posmv_hcorrstats ended after 0.7 seconds 2016-12-04 02:42:11,133 INFO repeater task posmv_plotposmv starting 1.1 seconds late 2016-12-04 02:42:11,564 INFO repeater task posmv_plotposmv ended after 0.4 seconds 2016-12-04 02:42:21,578 INFO repeater task wh300_lastensq starting 1.6 seconds late 2016-12-04 02:42:22,753 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:42:22,753 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:42:22,753 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:42:22,753 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:42:10 2016-12-04 02:42:27,760 INFO repeater task os38bb_lastensq starting 3.8 seconds late 2016-12-04 02:42:28,923 ERROR repeater task os38bb_lastensq returncode 24 2016-12-04 02:42:28,923 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:42:28,923 INFO repeater task os38bb_lastensq ended after 1.2 seconds 2016-12-04 02:42:28,923 INFO repeater task os38bb_lastensq: Time from /home/data/EX1608_01/proc/os38bb/load/wrote_ens_time: 2016/12/04 02:42:14 2016-12-04 02:42:28,924 INFO repeater task os38nb_lastensq starting 4.9 seconds late 2016-12-04 02:42:30,097 ERROR repeater task os38nb_lastensq returncode 24 2016-12-04 02:42:30,097 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:42:30,097 INFO repeater task os38nb_lastensq ended after 1.2 seconds 2016-12-04 02:42:30,098 INFO repeater task os38nb_lastensq: Time from /home/data/EX1608_01/proc/os38nb/load/wrote_ens_time: 2016/12/04 02:42:14 2016-12-04 02:42:50,152 INFO repeater task os38bb_10pings starting 0.1 seconds late 2016-12-04 02:42:50,269 INFO repeater task os38bb_10pings ended after 0.1 seconds 2016-12-04 02:42:50,271 INFO repeater task os38nb_10pings starting 0.2 seconds late 2016-12-04 02:42:50,376 INFO repeater task os38nb_10pings ended after 0.1 seconds 2016-12-04 02:43:50,555 INFO repeater task wh300_10pings starting 0.5 seconds late 2016-12-04 02:43:50,676 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:44:20,740 INFO repeater task wh300_lastensq starting 0.7 seconds late 2016-12-04 02:44:21,929 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:44:21,929 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:44:21,929 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:44:21,930 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:44:10 2016-12-04 02:46:12,194 INFO repeater task wh300_10pings starting 2.2 seconds late 2016-12-04 02:46:12,300 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:46:22,321 INFO repeater task wh300_lastensq starting 2.3 seconds late 2016-12-04 02:46:23,513 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:46:23,513 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:46:23,513 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:46:23,513 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:46:10 2016-12-04 02:47:13,641 INFO repeater task wh300_quick starting 3.6 seconds late 2016-12-04 02:47:15,046 INFO repeater task wh300_quick output: /usr/local/lib/python2.7/dist-packages/matplotlib-1.4.3-py2.7-linux-x86_64.egg/matplotlib/axes/_base.py:2809: UserWarning: Attempting to set identical bottom==top results in singular transformations; automatically expanding. bottom=0.0, top=0.0 'bottom=%s, top=%s') % (bottom, top)) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2016-12-04 02:47:15,046 INFO repeater task wh300_quick ended after 1.4 seconds 2016-12-04 02:47:15,046 INFO repeater task wh300_3dayplots starting 5.0 seconds late 2016-12-04 02:47:16,072 INFO repeater task wh300_3dayplots output: cannot make 3-day contour plots Traceback (most recent call last): File "/usr/local/currents/bin/run_3dayplots_mpl.py", line 382, in cruiseinfo.cruiseid, add_amp = options.plot_amp) File "/usr/local/currents/bin/run_3dayplots_mpl.py", line 315, in conplots aclim = amp_clim[procdirname[:2]]) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/dataplotter.py", line 765, in cuvplot nxticks=nxticks, aclim=aclim) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/dataplotter.py", line 832, in add_cuvamp vmin=aclim[0], vmax=aclim[1]) File "/usr/local/lib/python2.7/dist-packages/matplotlib-1.4.3-py2.7-linux-x86_64.egg/matplotlib/axes/_axes.py", line 5255, in pcolorfast if (np.ptp(dx) < 0.01 * np.abs(dx.mean()) and File "/usr/lib/python2.7/dist-packages/numpy/core/fromnumeric.py", line 2045, in ptp return ptp(axis, out) ValueError: zero-size array to reduction operation maximum which has no identity could not parse 338_wh300_ddaycont.png could not parse 338_wh300_latcont.png could not parse 338_wh300_loncont.png could not parse 338_wh300_ddaycont.png could not parse 338_wh300_latcont.png could not parse 338_wh300_loncont.png 2016-12-04 02:47:16,072 INFO repeater task wh300_3dayplots ended after 1.0 seconds 2016-12-04 02:47:16,072 INFO repeater task wh300_tsstats starting 6.0 seconds late 2016-12-04 02:47:16,615 INFO repeater task wh300_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2016-12-04 02:47:16,615 INFO repeater task wh300_tsstats ended after 0.5 seconds 2016-12-04 02:47:16,616 INFO repeater task os38bb_quick starting 6.6 seconds late 2016-12-04 02:47:17,985 INFO repeater task os38bb_quick output: /usr/local/lib/python2.7/dist-packages/matplotlib-1.4.3-py2.7-linux-x86_64.egg/matplotlib/axes/_base.py:2809: UserWarning: Attempting to set identical bottom==top results in singular transformations; automatically expanding. bottom=0.0, top=0.0 'bottom=%s, top=%s') % (bottom, top)) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2016-12-04 02:47:17,985 INFO repeater task os38bb_quick ended after 1.4 seconds 2016-12-04 02:47:17,985 INFO repeater task os38bb_3dayplots starting 7.9 seconds late 2016-12-04 02:47:18,917 INFO repeater task os38bb_3dayplots output: cannot make 3-day contour plots Traceback (most recent call last): File "/usr/local/currents/bin/run_3dayplots_mpl.py", line 382, in cruiseinfo.cruiseid, add_amp = options.plot_amp) File "/usr/local/currents/bin/run_3dayplots_mpl.py", line 315, in conplots aclim = amp_clim[procdirname[:2]]) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/dataplotter.py", line 765, in cuvplot nxticks=nxticks, aclim=aclim) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/dataplotter.py", line 832, in add_cuvamp vmin=aclim[0], vmax=aclim[1]) File "/usr/local/lib/python2.7/dist-packages/matplotlib-1.4.3-py2.7-linux-x86_64.egg/matplotlib/axes/_axes.py", line 5255, in pcolorfast if (np.ptp(dx) < 0.01 * np.abs(dx.mean()) and File "/usr/lib/python2.7/dist-packages/numpy/core/fromnumeric.py", line 2045, in ptp return ptp(axis, out) ValueError: zero-size array to reduction operation maximum which has no identity could not parse 338_os38bb_ddaycont.png could not parse 338_os38bb_latcont.png could not parse 338_os38bb_loncont.png could not parse 338_os38bb_ddaycont.png could not parse 338_os38bb_latcont.png could not parse 338_os38bb_loncont.png 2016-12-04 02:47:18,918 INFO repeater task os38bb_3dayplots ended after 0.9 seconds 2016-12-04 02:47:18,918 INFO repeater task os38bb_tsstats starting 8.9 seconds late 2016-12-04 02:47:19,430 INFO repeater task os38bb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2016-12-04 02:47:19,430 INFO repeater task os38bb_tsstats ended after 0.5 seconds 2016-12-04 02:47:19,430 INFO repeater task os38nb_quick starting 9.4 seconds late 2016-12-04 02:47:20,818 INFO repeater task os38nb_quick output: /usr/local/lib/python2.7/dist-packages/matplotlib-1.4.3-py2.7-linux-x86_64.egg/matplotlib/axes/_base.py:2809: UserWarning: Attempting to set identical bottom==top results in singular transformations; automatically expanding. bottom=0.0, top=0.0 'bottom=%s, top=%s') % (bottom, top)) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2016-12-04 02:47:20,818 INFO repeater task os38nb_quick ended after 1.4 seconds 2016-12-04 02:47:20,818 INFO repeater task os38nb_3dayplots starting 10.8 seconds late 2016-12-04 02:47:21,745 INFO repeater task os38nb_3dayplots output: cannot make 3-day contour plots Traceback (most recent call last): File "/usr/local/currents/bin/run_3dayplots_mpl.py", line 382, in cruiseinfo.cruiseid, add_amp = options.plot_amp) File "/usr/local/currents/bin/run_3dayplots_mpl.py", line 315, in conplots aclim = amp_clim[procdirname[:2]]) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/dataplotter.py", line 765, in cuvplot nxticks=nxticks, aclim=aclim) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/dataplotter.py", line 832, in add_cuvamp vmin=aclim[0], vmax=aclim[1]) File "/usr/local/lib/python2.7/dist-packages/matplotlib-1.4.3-py2.7-linux-x86_64.egg/matplotlib/axes/_axes.py", line 5255, in pcolorfast if (np.ptp(dx) < 0.01 * np.abs(dx.mean()) and File "/usr/lib/python2.7/dist-packages/numpy/core/fromnumeric.py", line 2045, in ptp return ptp(axis, out) ValueError: zero-size array to reduction operation maximum which has no identity could not parse 338_os38nb_ddaycont.png could not parse 338_os38nb_latcont.png could not parse 338_os38nb_loncont.png could not parse 338_os38nb_ddaycont.png could not parse 338_os38nb_latcont.png could not parse 338_os38nb_loncont.png 2016-12-04 02:47:21,745 INFO repeater task os38nb_3dayplots ended after 0.9 seconds 2016-12-04 02:47:21,745 INFO repeater task os38nb_tsstats starting 11.7 seconds late 2016-12-04 02:47:22,252 INFO repeater task os38nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2016-12-04 02:47:22,252 INFO repeater task os38nb_tsstats ended after 0.5 seconds 2016-12-04 02:47:22,252 INFO repeater task wh300_beamplots starting 12.2 seconds late 2016-12-04 02:47:23,160 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 02:47:23,160 INFO repeater task wh300_beamplots ended after 0.9 seconds 2016-12-04 02:47:23,160 INFO repeater task wh300_beamplots starting 13.1 seconds late 2016-12-04 02:47:24,076 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 02:47:24,076 INFO repeater task wh300_beamplots ended after 0.9 seconds 2016-12-04 02:47:24,076 INFO repeater task os38bb_beamplots starting 14.0 seconds late 2016-12-04 02:47:24,944 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 02:47:24,944 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2016-12-04 02:47:24,944 INFO repeater task os38bb_beamplots starting 14.9 seconds late 2016-12-04 02:47:25,800 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 02:47:25,800 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2016-12-04 02:47:25,800 INFO repeater task os38nb_beamplots starting 15.8 seconds late 2016-12-04 02:47:26,665 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 02:47:26,665 INFO repeater task os38nb_beamplots ended after 0.9 seconds 2016-12-04 02:47:26,666 INFO repeater task os38nb_beamplots starting 16.6 seconds late 2016-12-04 02:47:27,516 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 02:47:27,516 INFO repeater task os38nb_beamplots ended after 0.9 seconds 2016-12-04 02:47:27,516 INFO repeater task posmv_hcorrstats starting 17.5 seconds late 2016-12-04 02:47:28,259 INFO repeater task posmv_hcorrstats ended after 0.7 seconds 2016-12-04 02:47:28,260 INFO repeater task posmv_plotposmv starting 18.2 seconds late 2016-12-04 02:47:28,675 INFO repeater task posmv_plotposmv ended after 0.4 seconds 2016-12-04 02:47:33,681 INFO repeater task os38bb_lastensq starting 9.7 seconds late 2016-12-04 02:47:34,815 ERROR repeater task os38bb_lastensq returncode 24 2016-12-04 02:47:34,815 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:47:34,815 INFO repeater task os38bb_lastensq ended after 1.1 seconds 2016-12-04 02:47:34,815 INFO repeater task os38bb_lastensq: Time from /home/data/EX1608_01/proc/os38bb/load/wrote_ens_time: 2016/12/04 02:47:14 2016-12-04 02:47:34,816 INFO repeater task os38nb_lastensq starting 10.8 seconds late 2016-12-04 02:47:35,962 ERROR repeater task os38nb_lastensq returncode 24 2016-12-04 02:47:35,962 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:47:35,962 INFO repeater task os38nb_lastensq ended after 1.1 seconds 2016-12-04 02:47:35,962 INFO repeater task os38nb_lastensq: Time from /home/data/EX1608_01/proc/os38nb/load/wrote_ens_time: 2016/12/04 02:47:14 2016-12-04 02:48:11,054 INFO repeater task os38bb_10pings starting 1.0 seconds late 2016-12-04 02:48:11,153 INFO repeater task os38bb_10pings ended after 0.1 seconds 2016-12-04 02:48:11,154 INFO repeater task os38nb_10pings starting 1.1 seconds late 2016-12-04 02:48:11,267 INFO repeater task os38nb_10pings ended after 0.1 seconds 2016-12-04 02:48:21,289 INFO repeater task wh300_lastensq starting 1.3 seconds late 2016-12-04 02:48:22,462 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:48:22,462 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:48:22,463 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:48:22,463 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:48:10 2016-12-04 02:48:32,486 INFO repeater task wh300_10pings starting 2.5 seconds late 2016-12-04 02:48:32,611 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:50:22,811 INFO repeater task wh300_lastensq starting 2.8 seconds late 2016-12-04 02:50:24,058 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:50:24,058 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:50:24,058 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:50:24,059 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:50:10 2016-12-04 02:50:54,126 INFO repeater task wh300_10pings starting 4.1 seconds late 2016-12-04 02:50:54,244 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:52:14,464 INFO repeater task posmv_hcorrstats starting 4.4 seconds late 2016-12-04 02:52:15,249 INFO repeater task posmv_hcorrstats ended after 0.8 seconds 2016-12-04 02:52:15,249 INFO repeater task posmv_plotposmv starting 5.2 seconds late 2016-12-04 02:52:15,684 INFO repeater task posmv_plotposmv ended after 0.4 seconds 2016-12-04 02:52:20,690 INFO repeater task wh300_lastensq starting 0.7 seconds late 2016-12-04 02:52:21,882 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:52:21,882 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:52:21,882 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:52:21,883 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:52:10 2016-12-04 02:52:26,890 INFO repeater task os38bb_lastensq starting 2.9 seconds late 2016-12-04 02:52:28,026 ERROR repeater task os38bb_lastensq returncode 24 2016-12-04 02:52:28,026 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:52:28,026 INFO repeater task os38bb_lastensq ended after 1.1 seconds 2016-12-04 02:52:28,026 INFO repeater task os38bb_lastensq: Time from /home/data/EX1608_01/proc/os38bb/load/wrote_ens_time: 2016/12/04 02:52:14 2016-12-04 02:52:28,027 INFO repeater task os38nb_lastensq starting 4.0 seconds late 2016-12-04 02:52:29,199 ERROR repeater task os38nb_lastensq returncode 24 2016-12-04 02:52:29,199 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:52:29,199 INFO repeater task os38nb_lastensq ended after 1.2 seconds 2016-12-04 02:52:29,199 INFO repeater task os38nb_lastensq: Time from /home/data/EX1608_01/proc/os38nb/load/wrote_ens_time: 2016/12/04 02:52:14 2016-12-04 02:53:14,313 INFO repeater task wh300_10pings starting 4.3 seconds late 2016-12-04 02:53:14,430 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:53:34,494 INFO repeater task os38bb_10pings starting 4.5 seconds late 2016-12-04 02:53:34,609 INFO repeater task os38bb_10pings ended after 0.1 seconds 2016-12-04 02:53:34,610 INFO repeater task os38nb_10pings starting 4.6 seconds late 2016-12-04 02:53:34,711 INFO repeater task os38nb_10pings ended after 0.1 seconds 2016-12-04 02:54:24,848 INFO repeater task wh300_lastensq starting 4.8 seconds late 2016-12-04 02:54:26,082 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:54:26,082 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:54:26,082 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:54:26,082 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:54:10 2016-12-04 02:55:31,261 INFO repeater task wh300_10pings starting 1.2 seconds late 2016-12-04 02:55:31,372 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:56:21,502 INFO repeater task wh300_lastensq starting 1.5 seconds late 2016-12-04 02:56:22,719 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:56:22,719 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:56:22,719 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:56:22,719 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:56:10 2016-12-04 02:57:12,865 INFO repeater task posmv_hcorrstats starting 2.8 seconds late 2016-12-04 02:57:13,676 INFO repeater task posmv_hcorrstats ended after 0.8 seconds 2016-12-04 02:57:13,676 INFO repeater task posmv_plotposmv starting 3.6 seconds late 2016-12-04 02:57:14,088 INFO repeater task posmv_plotposmv ended after 0.4 seconds 2016-12-04 02:57:24,112 INFO repeater task os38bb_lastensq starting 0.1 seconds late 2016-12-04 02:57:25,284 ERROR repeater task os38bb_lastensq returncode 24 2016-12-04 02:57:25,284 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:57:25,284 INFO repeater task os38bb_lastensq ended after 1.2 seconds 2016-12-04 02:57:25,284 INFO repeater task os38bb_lastensq: Time from /home/data/EX1608_01/proc/os38bb/load/wrote_ens_time: 2016/12/04 02:57:14 2016-12-04 02:57:25,285 INFO repeater task os38nb_lastensq starting 1.3 seconds late 2016-12-04 02:57:26,437 ERROR repeater task os38nb_lastensq returncode 24 2016-12-04 02:57:26,437 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:57:26,438 INFO repeater task os38nb_lastensq ended after 1.2 seconds 2016-12-04 02:57:26,438 INFO repeater task os38nb_lastensq: Time from /home/data/EX1608_01/proc/os38nb/load/wrote_ens_time: 2016/12/04 02:57:14 2016-12-04 02:57:51,495 INFO repeater task wh300_10pings starting 1.5 seconds late 2016-12-04 02:57:51,615 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 02:58:21,681 INFO repeater task wh300_lastensq starting 1.7 seconds late 2016-12-04 02:58:22,858 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 02:58:22,858 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 02:58:22,858 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 02:58:22,858 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 02:58:10 2016-12-04 02:58:52,934 INFO repeater task os38bb_10pings starting 2.9 seconds late 2016-12-04 02:58:53,054 INFO repeater task os38bb_10pings ended after 0.1 seconds 2016-12-04 02:58:53,055 INFO repeater task os38nb_10pings starting 3.0 seconds late 2016-12-04 02:58:53,164 INFO repeater task os38nb_10pings ended after 0.1 seconds 2016-12-04 03:00:13,394 INFO repeater task wh300_10pings starting 3.4 seconds late 2016-12-04 03:00:13,515 INFO repeater task wh300_10pings ended after 0.1 seconds 2016-12-04 03:00:23,537 INFO repeater task wh300_lastensq starting 3.5 seconds late 2016-12-04 03:00:24,716 ERROR repeater task wh300_lastensq returncode 24 2016-12-04 03:00:24,716 INFO repeater task wh300_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 03:00:24,716 INFO repeater task wh300_lastensq ended after 1.2 seconds 2016-12-04 03:00:24,716 INFO repeater task wh300_lastensq: Time from /home/data/EX1608_01/proc/wh300/load/wrote_ens_time: 2016/12/04 03:00:10 2016-12-04 03:02:14,980 INFO repeater task wh300_quick starting 4.9 seconds late 2016-12-04 03:02:16,260 INFO repeater task wh300_quick output: /usr/local/lib/python2.7/dist-packages/matplotlib-1.4.3-py2.7-linux-x86_64.egg/matplotlib/axes/_base.py:2809: UserWarning: Attempting to set identical bottom==top results in singular transformations; automatically expanding. bottom=0.0, top=0.0 'bottom=%s, top=%s') % (bottom, top)) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2016-12-04 03:02:16,260 INFO repeater task wh300_quick ended after 1.3 seconds 2016-12-04 03:02:16,260 INFO repeater task wh300_3dayplots starting 6.2 seconds late 2016-12-04 03:02:18,565 INFO repeater task wh300_3dayplots ended after 2.3 seconds 2016-12-04 03:02:18,565 INFO repeater task wh300_tsstats starting 8.5 seconds late 2016-12-04 03:02:19,057 INFO repeater task wh300_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2016-12-04 03:02:19,057 INFO repeater task wh300_tsstats ended after 0.5 seconds 2016-12-04 03:02:19,057 INFO repeater task os38bb_quick starting 9.0 seconds late 2016-12-04 03:02:20,368 INFO repeater task os38bb_quick output: /usr/local/lib/python2.7/dist-packages/matplotlib-1.4.3-py2.7-linux-x86_64.egg/matplotlib/axes/_base.py:2809: UserWarning: Attempting to set identical bottom==top results in singular transformations; automatically expanding. bottom=0.0, top=0.0 'bottom=%s, top=%s') % (bottom, top)) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2016-12-04 03:02:20,368 INFO repeater task os38bb_quick ended after 1.3 seconds 2016-12-04 03:02:20,368 INFO repeater task os38bb_3dayplots starting 10.3 seconds late 2016-12-04 03:02:22,611 INFO repeater task os38bb_3dayplots ended after 2.2 seconds 2016-12-04 03:02:22,612 INFO repeater task os38bb_tsstats starting 12.6 seconds late 2016-12-04 03:02:23,150 INFO repeater task os38bb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2016-12-04 03:02:23,150 INFO repeater task os38bb_tsstats ended after 0.5 seconds 2016-12-04 03:02:23,151 INFO repeater task os38nb_quick starting 13.1 seconds late 2016-12-04 03:02:24,489 INFO repeater task os38nb_quick output: /usr/local/lib/python2.7/dist-packages/matplotlib-1.4.3-py2.7-linux-x86_64.egg/matplotlib/axes/_base.py:2809: UserWarning: Attempting to set identical bottom==top results in singular transformations; automatically expanding. bottom=0.0, top=0.0 'bottom=%s, top=%s') % (bottom, top)) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) 2016-12-04 03:02:24,489 INFO repeater task os38nb_quick ended after 1.3 seconds 2016-12-04 03:02:24,489 INFO repeater task os38nb_3dayplots starting 14.5 seconds late 2016-12-04 03:02:26,823 INFO repeater task os38nb_3dayplots ended after 2.3 seconds 2016-12-04 03:02:26,823 INFO repeater task os38nb_tsstats starting 16.8 seconds late 2016-12-04 03:02:27,325 INFO repeater task os38nb_tsstats output: /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") 2016-12-04 03:02:27,325 INFO repeater task os38nb_tsstats ended after 0.5 seconds 2016-12-04 03:02:27,326 INFO repeater task wh300_beamplots starting 17.3 seconds late 2016-12-04 03:02:28,205 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 03:02:28,205 INFO repeater task wh300_beamplots ended after 0.9 seconds 2016-12-04 03:02:28,205 INFO repeater task wh300_beamplots starting 18.2 seconds late 2016-12-04 03:02:29,090 INFO repeater task wh300_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 03:02:29,091 INFO repeater task wh300_beamplots ended after 0.9 seconds 2016-12-04 03:02:29,091 INFO repeater task os38bb_beamplots starting 19.1 seconds late 2016-12-04 03:02:29,948 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 03:02:29,948 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2016-12-04 03:02:29,949 INFO repeater task os38bb_beamplots starting 19.9 seconds late 2016-12-04 03:02:30,811 INFO repeater task os38bb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 03:02:30,811 INFO repeater task os38bb_beamplots ended after 0.9 seconds 2016-12-04 03:02:30,812 INFO repeater task os38nb_beamplots starting 20.8 seconds late 2016-12-04 03:02:31,649 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 03:02:31,649 INFO repeater task os38nb_beamplots ended after 0.8 seconds 2016-12-04 03:02:31,649 INFO repeater task os38nb_beamplots starting 21.6 seconds late 2016-12-04 03:02:32,467 INFO repeater task os38nb_beamplots output: Starting procsetup scriptpath is /usr/local/currents/bin 2016-12-04 03:02:32,467 INFO repeater task os38nb_beamplots ended after 0.8 seconds 2016-12-04 03:02:32,467 INFO repeater task posmv_hcorrstats starting 22.4 seconds late 2016-12-04 03:02:33,298 INFO repeater task posmv_hcorrstats ended after 0.8 seconds 2016-12-04 03:02:33,299 INFO repeater task posmv_plotposmv starting 23.3 seconds late 2016-12-04 03:02:33,709 INFO repeater task posmv_plotposmv ended after 0.4 seconds 2016-12-04 03:02:37,886 INFO Translate translate exiting, gps /home/data/EX1608_01/rbin/posmv 2016-12-04 03:02:37,892 INFO Translate translate exiting, pmv /home/data/EX1608_01/rbin/posmv 2016-12-04 03:02:37,894 INFO Translate translate exiting, hdg /home/data/EX1608_01/rbin/gyro 2016-12-04 03:02:37,903 INFO Translate translate exiting, gps /home/data/EX1608_01/rbin/cnav 2016-12-04 03:02:38,714 INFO root cleanup_figs not_logging 2016-12-04 03:02:38,727 INFO root Exiting DAS_while_logging.py 2016-12-04 04:05:14,509 INFO root Starting DAS_while_logging.py 2016-12-04 04:05:14,521 INFO root Cruiseid: EX1608_Testing 2016-12-04 04:05:14,537 INFO root starting run method 2016-12-04 04:05:14,537 INFO root speedlog_stopflagfile: /home/adcp/flags/DAS_speedlog.stop 2016-12-04 04:05:14,537 INFO root speedlog_runflagfile: /home/adcp/flags/DAS_speedlog.running 2016-12-04 04:05:14,538 INFO root speedlog command is /usr/local/currents/bin/DAS_speedlog.py & 2016-12-04 04:05:14,538 INFO Translate gyro hdg 1 2016-12-04 04:05:14,539 INFO Translate 2016-12-04 04:05:14,539 INFO Translate posmv gps 1 2016-12-04 04:05:14,539 INFO Translate 2016-12-04 04:05:14,539 INFO Translate posmv pmv 0 2016-12-04 04:05:14,539 INFO Translate 2016-12-04 04:05:14,539 INFO Translate cnav gps 1 2016-12-04 04:05:14,539 INFO Translate 2016-12-04 04:05:14,540 INFO root active_procdirnames: ['os38bb', 'os38nb'] 2016-12-04 04:05:14,540 INFO repeater PeriodicSystem: os38bb_lastensq interval is 310 seconds cd /home/adcp/uhdas_tmp; run_lastensq.py -d os38bb --update_pygbin --averages --plotens_mpl --kt_vecprof --pingwarnN 30 --ktsdir 2016-12-04 04:05:14,540 INFO repeater PeriodicSystem: os38bb_10pings interval is 320 seconds cd /home/adcp/uhdas_tmp; run_grab_lastpings.py -d os38bb 2016-12-04 04:05:14,541 INFO repeater PeriodicSystem: os38bb_quick interval is 900 seconds cd /home/adcp/uhdas_tmp; run_quick.py -d os38bb 2016-12-04 04:05:14,541 INFO repeater PeriodicSystem: os38bb_3dayplots interval is 900 seconds cd /home/adcp/uhdas_tmp; run_3dayplots_mpl.py -d os38bb --plot_amp 2016-12-04 04:05:14,541 INFO repeater PeriodicSystem: os38bb_tsstats interval is 900 seconds cd /home/adcp/uhdas_tmp; run_plot_tsstats.py os38bb 2016-12-04 04:05:14,541 INFO repeater PeriodicSystem: os38nb_lastensq interval is 310 seconds cd /home/adcp/uhdas_tmp; run_lastensq.py -d os38nb --update_pygbin --averages --plotens_mpl --kt_vecprof --pingwarnN 30 2016-12-04 04:05:14,542 INFO repeater PeriodicSystem: os38nb_10pings interval is 320 seconds cd /home/adcp/uhdas_tmp; run_grab_lastpings.py -d os38nb 2016-12-04 04:05:14,542 INFO repeater PeriodicSystem: os38nb_quick interval is 900 seconds cd /home/adcp/uhdas_tmp; run_quick.py -d os38nb 2016-12-04 04:05:14,542 INFO repeater PeriodicSystem: os38nb_3dayplots interval is 900 seconds cd /home/adcp/uhdas_tmp; run_3dayplots_mpl.py -d os38nb --plot_amp 2016-12-04 04:05:14,542 INFO repeater PeriodicSystem: os38nb_tsstats interval is 900 seconds cd /home/adcp/uhdas_tmp; run_plot_tsstats.py os38nb 2016-12-04 04:05:14,542 INFO repeater PeriodicSystem: os38bb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38bb --savefigs --webcopy -p scattering 2016-12-04 04:05:14,542 INFO repeater PeriodicSystem: os38bb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38bb --savefigs --webcopy -p velocity 2016-12-04 04:05:14,543 INFO repeater PeriodicSystem: os38nb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38nb --savefigs --webcopy -p scattering 2016-12-04 04:05:14,543 INFO repeater PeriodicSystem: os38nb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38nb --savefigs --webcopy -p velocity 2016-12-04 04:05:14,544 INFO repeater PeriodicSystem: posmv_hcorrstats interval is 300 seconds cd /home/adcp/uhdas_tmp; run_update_hbins.py; run_hbinhcorrstats.py --hcorr_inst posmv --plotdh --printstats 2016-12-04 04:05:14,544 INFO repeater PeriodicSystem: posmv_plotposmv interval is 300 seconds cd /home/adcp/uhdas_tmp; run_plotposmv.py -n25 -d posmv 2016-12-04 04:05:14,545 INFO root cleanup_figs no_figure 2016-12-04 04:06:09,851 INFO Translate translate exiting, gps /home/data/EX1608_Testing/rbin/posmv 2016-12-04 04:06:09,851 INFO Translate translate exiting, hdg /home/data/EX1608_Testing/rbin/gyro 2016-12-04 04:06:09,852 INFO Translate translate exiting, pmv /home/data/EX1608_Testing/rbin/posmv 2016-12-04 04:06:09,887 INFO Translate translate exiting, gps /home/data/EX1608_Testing/rbin/cnav 2016-12-04 04:06:14,677 INFO root cleanup_figs not_logging 2016-12-04 04:06:14,691 INFO root Exiting DAS_while_logging.py 2016-12-04 04:06:31,551 INFO root Starting DAS_while_logging.py 2016-12-04 04:06:31,562 INFO root Cruiseid: EX1608_Testing 2016-12-04 04:06:31,574 INFO root starting run method 2016-12-04 04:06:31,574 INFO root speedlog_stopflagfile: /home/adcp/flags/DAS_speedlog.stop 2016-12-04 04:06:31,574 INFO root speedlog_runflagfile: /home/adcp/flags/DAS_speedlog.running 2016-12-04 04:06:31,575 INFO root speedlog command is /usr/local/currents/bin/DAS_speedlog.py & 2016-12-04 04:06:31,576 INFO Translate gyro hdg 1 2016-12-04 04:06:31,576 INFO Translate 2016-12-04 04:06:31,576 INFO Translate posmv gps 1 2016-12-04 04:06:31,576 INFO Translate 2016-12-04 04:06:31,576 INFO Translate posmv pmv 0 2016-12-04 04:06:31,576 INFO Translate 2016-12-04 04:06:31,576 INFO Translate cnav gps 1 2016-12-04 04:06:31,576 INFO Translate 2016-12-04 04:06:31,577 INFO root active_procdirnames: ['os38bb', 'os38nb'] 2016-12-04 04:06:31,577 INFO repeater PeriodicSystem: os38bb_lastensq interval is 310 seconds cd /home/adcp/uhdas_tmp; run_lastensq.py -d os38bb --update_pygbin --averages --plotens_mpl --kt_vecprof --pingwarnN 30 --ktsdir 2016-12-04 04:06:31,578 INFO repeater PeriodicSystem: os38bb_10pings interval is 320 seconds cd /home/adcp/uhdas_tmp; run_grab_lastpings.py -d os38bb 2016-12-04 04:06:31,578 INFO repeater PeriodicSystem: os38bb_quick interval is 900 seconds cd /home/adcp/uhdas_tmp; run_quick.py -d os38bb 2016-12-04 04:06:31,578 INFO repeater PeriodicSystem: os38bb_3dayplots interval is 900 seconds cd /home/adcp/uhdas_tmp; run_3dayplots_mpl.py -d os38bb --plot_amp 2016-12-04 04:06:31,578 INFO repeater PeriodicSystem: os38bb_tsstats interval is 900 seconds cd /home/adcp/uhdas_tmp; run_plot_tsstats.py os38bb 2016-12-04 04:06:31,579 INFO repeater PeriodicSystem: os38nb_lastensq interval is 310 seconds cd /home/adcp/uhdas_tmp; run_lastensq.py -d os38nb --update_pygbin --averages --plotens_mpl --kt_vecprof --pingwarnN 30 2016-12-04 04:06:31,579 INFO repeater PeriodicSystem: os38nb_10pings interval is 320 seconds cd /home/adcp/uhdas_tmp; run_grab_lastpings.py -d os38nb 2016-12-04 04:06:31,579 INFO repeater PeriodicSystem: os38nb_quick interval is 900 seconds cd /home/adcp/uhdas_tmp; run_quick.py -d os38nb 2016-12-04 04:06:31,579 INFO repeater PeriodicSystem: os38nb_3dayplots interval is 900 seconds cd /home/adcp/uhdas_tmp; run_3dayplots_mpl.py -d os38nb --plot_amp 2016-12-04 04:06:31,579 INFO repeater PeriodicSystem: os38nb_tsstats interval is 900 seconds cd /home/adcp/uhdas_tmp; run_plot_tsstats.py os38nb 2016-12-04 04:06:31,579 INFO repeater PeriodicSystem: os38bb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38bb --savefigs --webcopy -p scattering 2016-12-04 04:06:31,580 INFO repeater PeriodicSystem: os38bb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38bb --savefigs --webcopy -p velocity 2016-12-04 04:06:31,580 INFO repeater PeriodicSystem: os38nb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38nb --savefigs --webcopy -p scattering 2016-12-04 04:06:31,580 INFO repeater PeriodicSystem: os38nb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38nb --savefigs --webcopy -p velocity 2016-12-04 04:06:31,581 INFO repeater PeriodicSystem: posmv_hcorrstats interval is 300 seconds cd /home/adcp/uhdas_tmp; run_update_hbins.py; run_hbinhcorrstats.py --hcorr_inst posmv --plotdh --printstats 2016-12-04 04:06:31,581 INFO repeater PeriodicSystem: posmv_plotposmv interval is 300 seconds cd /home/adcp/uhdas_tmp; run_plotposmv.py -n25 -d posmv 2016-12-04 04:06:31,582 INFO root cleanup_figs no_figure 2016-12-04 04:11:32,218 INFO repeater task posmv_hcorrstats starting 0.6 seconds late 2016-12-04 04:11:33,053 INFO repeater task posmv_hcorrstats ended after 0.8 seconds 2016-12-04 04:11:33,053 INFO repeater task posmv_plotposmv starting 1.5 seconds late 2016-12-04 04:11:34,153 INFO repeater task posmv_plotposmv ended after 1.1 seconds 2016-12-04 04:11:44,169 INFO repeater task os38bb_lastensq starting 2.6 seconds late 2016-12-04 04:11:45,392 ERROR repeater task os38bb_lastensq returncode 24 2016-12-04 04:11:45,393 INFO repeater task os38bb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 04:11:45,393 INFO repeater task os38bb_lastensq ended after 1.2 seconds 2016-12-04 04:11:45,398 INFO repeater task os38bb_lastensq: Time from /home/data/EX1608_Testing/proc/os38bb/load/wrote_ens_time: 2016/12/04 04:10:19 2016-12-04 04:11:45,399 INFO repeater task os38nb_lastensq starting 3.8 seconds late 2016-12-04 04:11:46,580 ERROR repeater task os38nb_lastensq returncode 24 2016-12-04 04:11:46,580 INFO repeater task os38nb_lastensq output: /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:55: RuntimeWarning: Mean of empty slice. warnings.warn("Mean of empty slice.", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/core/_methods.py:79: RuntimeWarning: Degrees of freedom <= 0 for slice warnings.warn("Degrees of freedom <= 0 for slice", RuntimeWarning) /usr/lib/python2.7/dist-packages/numpy/ma/core.py:3847: UserWarning: Warning: converting a masked element to nan. warnings.warn("Warning: converting a masked element to nan.") In body of run_lastensq.py Traceback (most recent call last): File "/usr/local/currents/bin/run_lastensq.py", line 414, in E(plotname = 'kt_vecprof', zbin=4) #colorscheme='day' File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 201, in __call__ self.fig5 = self.plot_vecprof_ktvec(zbin=zbin, vcolor=vcolor) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 510, in plot_vecprof_ktvec self.plot_ktvec2(fig=fig, ax1=ax[1], xtext=.75, textsize=18, ytextshift=.15) File "/usr/local/lib/python2.7/dist-packages/pycurrents/adcp/ensplot.py", line 844, in plot_ktvec2 self.ktdir_data.u = u UnboundLocalError: local variable 'u' referenced before assignment 2016-12-04 04:11:46,580 INFO repeater task os38nb_lastensq ended after 1.2 seconds 2016-12-04 04:11:46,580 INFO repeater task os38nb_lastensq: Time from /home/data/EX1608_Testing/proc/os38nb/load/wrote_ens_time: 2016/12/04 04:10:19 2016-12-04 04:11:51,589 INFO repeater task os38bb_10pings starting 0.0 seconds late 2016-12-04 04:11:51,709 INFO repeater task os38bb_10pings ended after 0.1 seconds 2016-12-04 04:11:51,710 INFO repeater task os38nb_10pings starting 0.1 seconds late 2016-12-04 04:11:51,818 INFO repeater task os38nb_10pings ended after 0.1 seconds 2016-12-04 04:15:28,826 INFO Translate translate exiting, gps /home/data/EX1608_Testing/rbin/cnav 2016-12-04 04:15:28,828 INFO Translate translate exiting, hdg /home/data/EX1608_Testing/rbin/gyro 2016-12-04 04:15:28,828 INFO Translate translate exiting, pmv /home/data/EX1608_Testing/rbin/posmv 2016-12-04 04:15:28,843 INFO Translate translate exiting, gps /home/data/EX1608_Testing/rbin/posmv 2016-12-04 04:15:32,293 INFO root cleanup_figs not_logging 2016-12-04 04:15:32,307 INFO root Exiting DAS_while_logging.py 2016-12-04 04:24:10,602 INFO root Starting DAS_while_logging.py 2016-12-04 04:24:10,614 INFO root Cruiseid: EX1608_Testing 2016-12-04 04:24:10,630 INFO root starting run method 2016-12-04 04:24:10,630 INFO root speedlog_stopflagfile: /home/adcp/flags/DAS_speedlog.stop 2016-12-04 04:24:10,630 INFO root speedlog_runflagfile: /home/adcp/flags/DAS_speedlog.running 2016-12-04 04:24:10,631 INFO root speedlog command is /usr/local/currents/bin/DAS_speedlog.py & 2016-12-04 04:24:10,631 INFO Translate gyro hdg 1 2016-12-04 04:24:10,631 INFO Translate 2016-12-04 04:24:10,631 INFO Translate posmv gps 1 2016-12-04 04:24:10,631 INFO Translate 2016-12-04 04:24:10,632 INFO Translate posmv pmv 0 2016-12-04 04:24:10,632 INFO Translate 2016-12-04 04:24:10,632 INFO Translate cnav gps 1 2016-12-04 04:24:10,632 INFO Translate 2016-12-04 04:24:10,633 INFO root active_procdirnames: ['os38bb', 'os38nb'] 2016-12-04 04:24:10,633 INFO repeater PeriodicSystem: os38bb_lastensq interval is 310 seconds cd /home/adcp/uhdas_tmp; run_lastensq.py -d os38bb --update_pygbin --averages --plotens_mpl --kt_vecprof --pingwarnN 30 --ktsdir 2016-12-04 04:24:10,634 INFO repeater PeriodicSystem: os38bb_10pings interval is 320 seconds cd /home/adcp/uhdas_tmp; run_grab_lastpings.py -d os38bb 2016-12-04 04:24:10,634 INFO repeater PeriodicSystem: os38bb_quick interval is 900 seconds cd /home/adcp/uhdas_tmp; run_quick.py -d os38bb 2016-12-04 04:24:10,635 INFO repeater PeriodicSystem: os38bb_3dayplots interval is 900 seconds cd /home/adcp/uhdas_tmp; run_3dayplots_mpl.py -d os38bb --plot_amp 2016-12-04 04:24:10,635 INFO repeater PeriodicSystem: os38bb_tsstats interval is 900 seconds cd /home/adcp/uhdas_tmp; run_plot_tsstats.py os38bb 2016-12-04 04:24:10,635 INFO repeater PeriodicSystem: os38nb_lastensq interval is 310 seconds cd /home/adcp/uhdas_tmp; run_lastensq.py -d os38nb --update_pygbin --averages --plotens_mpl --kt_vecprof --pingwarnN 30 2016-12-04 04:24:10,635 INFO repeater PeriodicSystem: os38nb_10pings interval is 320 seconds cd /home/adcp/uhdas_tmp; run_grab_lastpings.py -d os38nb 2016-12-04 04:24:10,635 INFO repeater PeriodicSystem: os38nb_quick interval is 900 seconds cd /home/adcp/uhdas_tmp; run_quick.py -d os38nb 2016-12-04 04:24:10,635 INFO repeater PeriodicSystem: os38nb_3dayplots interval is 900 seconds cd /home/adcp/uhdas_tmp; run_3dayplots_mpl.py -d os38nb --plot_amp 2016-12-04 04:24:10,636 INFO repeater PeriodicSystem: os38nb_tsstats interval is 900 seconds cd /home/adcp/uhdas_tmp; run_plot_tsstats.py os38nb 2016-12-04 04:24:10,636 INFO repeater PeriodicSystem: os38bb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38bb --savefigs --webcopy -p scattering 2016-12-04 04:24:10,636 INFO repeater PeriodicSystem: os38bb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38bb --savefigs --webcopy -p velocity 2016-12-04 04:24:10,636 INFO repeater PeriodicSystem: os38nb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38nb --savefigs --webcopy -p scattering 2016-12-04 04:24:10,636 INFO repeater PeriodicSystem: os38nb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38nb --savefigs --webcopy -p velocity 2016-12-04 04:24:10,638 INFO repeater PeriodicSystem: posmv_hcorrstats interval is 300 seconds cd /home/adcp/uhdas_tmp; run_update_hbins.py; run_hbinhcorrstats.py --hcorr_inst posmv --plotdh --printstats 2016-12-04 04:24:10,638 INFO repeater PeriodicSystem: posmv_plotposmv interval is 300 seconds cd /home/adcp/uhdas_tmp; run_plotposmv.py -n25 -d posmv 2016-12-04 04:24:10,638 INFO root cleanup_figs no_figure 2016-12-04 04:26:23,889 INFO Translate translate exiting, gps /home/data/EX1608_Testing/rbin/cnav 2016-12-04 04:26:23,919 INFO Translate translate exiting, hdg /home/data/EX1608_Testing/rbin/gyro 2016-12-04 04:26:23,920 INFO Translate translate exiting, gps /home/data/EX1608_Testing/rbin/posmv 2016-12-04 04:26:23,920 INFO Translate translate exiting, pmv /home/data/EX1608_Testing/rbin/posmv 2016-12-04 04:26:25,913 INFO root cleanup_figs not_logging 2016-12-04 04:26:25,924 INFO root Exiting DAS_while_logging.py 2016-12-04 04:26:44,503 INFO root Starting DAS_while_logging.py 2016-12-04 04:26:44,515 INFO root Cruiseid: EX1608_Testing 2016-12-04 04:26:44,527 INFO root starting run method 2016-12-04 04:26:44,527 INFO root speedlog_stopflagfile: /home/adcp/flags/DAS_speedlog.stop 2016-12-04 04:26:44,527 INFO root speedlog_runflagfile: /home/adcp/flags/DAS_speedlog.running 2016-12-04 04:26:44,528 INFO root speedlog command is /usr/local/currents/bin/DAS_speedlog.py & 2016-12-04 04:26:44,529 INFO Translate gyro hdg 1 2016-12-04 04:26:44,529 INFO Translate 2016-12-04 04:26:44,529 INFO Translate posmv gps 1 2016-12-04 04:26:44,529 INFO Translate 2016-12-04 04:26:44,529 INFO Translate posmv pmv 0 2016-12-04 04:26:44,529 INFO Translate 2016-12-04 04:26:44,529 INFO Translate cnav gps 1 2016-12-04 04:26:44,529 INFO Translate 2016-12-04 04:26:44,531 INFO root active_procdirnames: ['os38bb', 'os38nb'] 2016-12-04 04:26:44,531 INFO repeater PeriodicSystem: os38bb_lastensq interval is 310 seconds cd /home/adcp/uhdas_tmp; run_lastensq.py -d os38bb --update_pygbin --averages --plotens_mpl --kt_vecprof --pingwarnN 30 --ktsdir 2016-12-04 04:26:44,532 INFO repeater PeriodicSystem: os38bb_10pings interval is 320 seconds cd /home/adcp/uhdas_tmp; run_grab_lastpings.py -d os38bb 2016-12-04 04:26:44,532 INFO repeater PeriodicSystem: os38bb_quick interval is 900 seconds cd /home/adcp/uhdas_tmp; run_quick.py -d os38bb 2016-12-04 04:26:44,533 INFO repeater PeriodicSystem: os38bb_3dayplots interval is 900 seconds cd /home/adcp/uhdas_tmp; run_3dayplots_mpl.py -d os38bb --plot_amp 2016-12-04 04:26:44,533 INFO repeater PeriodicSystem: os38bb_tsstats interval is 900 seconds cd /home/adcp/uhdas_tmp; run_plot_tsstats.py os38bb 2016-12-04 04:26:44,533 INFO repeater PeriodicSystem: os38nb_lastensq interval is 310 seconds cd /home/adcp/uhdas_tmp; run_lastensq.py -d os38nb --update_pygbin --averages --plotens_mpl --kt_vecprof --pingwarnN 30 2016-12-04 04:26:44,533 INFO repeater PeriodicSystem: os38nb_10pings interval is 320 seconds cd /home/adcp/uhdas_tmp; run_grab_lastpings.py -d os38nb 2016-12-04 04:26:44,534 INFO repeater PeriodicSystem: os38nb_quick interval is 900 seconds cd /home/adcp/uhdas_tmp; run_quick.py -d os38nb 2016-12-04 04:26:44,534 INFO repeater PeriodicSystem: os38nb_3dayplots interval is 900 seconds cd /home/adcp/uhdas_tmp; run_3dayplots_mpl.py -d os38nb --plot_amp 2016-12-04 04:26:44,535 INFO repeater PeriodicSystem: os38nb_tsstats interval is 900 seconds cd /home/adcp/uhdas_tmp; run_plot_tsstats.py os38nb 2016-12-04 04:26:44,535 INFO repeater PeriodicSystem: os38bb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38bb --savefigs --webcopy -p scattering 2016-12-04 04:26:44,535 INFO repeater PeriodicSystem: os38bb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38bb --savefigs --webcopy -p velocity 2016-12-04 04:26:44,536 INFO repeater PeriodicSystem: os38nb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38nb --savefigs --webcopy -p scattering 2016-12-04 04:26:44,536 INFO repeater PeriodicSystem: os38nb_beamplots interval is 900 seconds cd /home/adcp/uhdas_tmp; plot_beamdiagnostics.py -m 20 -d os38nb --savefigs --webcopy -p velocity 2016-12-04 04:26:44,539 INFO repeater PeriodicSystem: posmv_hcorrstats interval is 300 seconds cd /home/adcp/uhdas_tmp; run_update_hbins.py; run_hbinhcorrstats.py --hcorr_inst posmv --plotdh --printstats 2016-12-04 04:26:44,539 INFO repeater PeriodicSystem: posmv_plotposmv interval is 300 seconds cd /home/adcp/uhdas_tmp; run_plotposmv.py -n25 -d posmv 2016-12-04 04:26:44,539 INFO root cleanup_figs no_figure 2016-12-04 04:29:39,888 INFO Translate translate exiting, gps /home/data/EX1608_Testing/rbin/posmv 2016-12-04 04:29:39,889 INFO Translate translate exiting, hdg /home/data/EX1608_Testing/rbin/gyro 2016-12-04 04:29:39,890 INFO Translate translate exiting, pmv /home/data/EX1608_Testing/rbin/posmv 2016-12-04 04:29:39,905 INFO Translate translate exiting, gps /home/data/EX1608_Testing/rbin/cnav 2016-12-04 04:29:39,911 INFO root cleanup_figs not_logging 2016-12-04 04:29:39,924 INFO root Exiting DAS_while_logging.py