2016-03-12 04:10:01,646 INFO     quick_adcp   importing numpy version 1.8.2
2016-03-12 04:10:01,655 INFO     quick_adcp   importing matplotlib version 1.4.3
2016-03-12 04:10:01,755 INFO     quick_adcp   =====================================================
2016-03-12 04:10:01,755 INFO     quick_adcp   =====================================================
2016-03-12 04:10:01,755 INFO     quick_adcp   command line was: /usr/local/currents/bin/run_quick.py -d wh300
2016-03-12 04:10:01,755 INFO     quick_adcp   cwd is /home/data/EX1603_04/proc/wh300
about to run these steps:
 - write_clearflags
 - scandata
 - avg_and_load
 - codaseditsetup
 - setflags
 - getnav
 - lst_hdg
 - plot_headcorr
 - navsteps
 - find_pflags
 - apply_edit
 - navsteps
 - lst_temp
 - plot_temp
 - lst_npings
 - calib
 - matfiles
 - adcpsect
 - refabs
 - smoothnav
 - putnav
 - refplots
 - find_pflags
 - codaseditsetup
2016-03-12 04:10:01,756 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:01,756 INFO     quick_adcp   step 1: set up files in "edit" directory 

2016-03-12 04:10:01,756 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:01,756 INFO     quick_adcp   step 2: scan files for time range

2016-03-12 04:10:01,760 INFO     quick_adcp   looking for database with adcpdb/a_ex*.blk
2016-03-12 04:10:01,760 INFO     quick_adcp   database found: listing blocks
2016-03-12 04:10:01,766 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:01,766 INFO     quick_adcp   step 3: generate averaged data...
2016-03-12 04:10:01,781 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:01,781 INFO     quick_adcp   step 4: load averaged data (to database)
2016-03-12 04:10:01,796 INFO     quick_adcp   database time range:
2016-03-12 04:10:01,796 INFO     quick_adcp   2016/03/12  01:42:00 to 2016/03/12  04:08:00
2016-03-12 04:10:01,796 INFO     quick_adcp   (71.070833 to 71.172222)
2016-03-12 04:10:01,800 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:01,800 INFO     quick_adcp   step 5: set up files for codas editing (gautoedit.py)

2016-03-12 04:10:01,800 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:01,800 INFO     quick_adcp   step 6: run setflags?

2016-03-12 04:10:01,803 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:01,803 INFO     quick_adcp   step 7: get navigation

2016-03-12 04:10:02,006 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:02,006 INFO     quick_adcp   step 8: list heading

2016-03-12 04:10:02,010 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:02,010 INFO     quick_adcp   step 9: plot heading correction

2016-03-12 04:10:02,225 INFO     quick_adcp   
-------------------------
2016-03-12 04:10:02,225 INFO     quick_adcp   ---- running navsteps ---
2016-03-12 04:10:02,225 INFO     quick_adcp   -------------------------
2016-03-12 04:10:02,225 INFO     quick_adcp   step 10: nav steps: run adcpsect
2016-03-12 04:10:02,225 INFO     quick_adcp   navstep 1
2016-03-12 04:10:02,230 INFO     quick_adcp   -------------------------
2016-03-12 04:10:02,230 INFO     quick_adcp   step 11: nav steps: run refabs
2016-03-12 04:10:02,230 INFO     quick_adcp   navstep 2
2016-03-12 04:10:02,233 INFO     quick_adcp   -------------------------
2016-03-12 04:10:02,234 INFO     quick_adcp   step 12: nav steps: run smoothr for plots
2016-03-12 04:10:02,234 INFO     quick_adcp   navstep 3
2016-03-12 04:10:02,239 INFO     quick_adcp   -------------------------
2016-03-12 04:10:02,239 INFO     quick_adcp   step 13: nav steps: smooth navigation for velocities
2016-03-12 04:10:02,239 INFO     quick_adcp   navstep 4
2016-03-12 04:10:02,248 INFO     quick_adcp   -------------------------
2016-03-12 04:10:02,248 INFO     quick_adcp   step 14: nav steps: put positions and uvship from refsm into codasdb 
2016-03-12 04:10:02,249 INFO     quick_adcp   navstep 5
2016-03-12 04:10:02,451 INFO     quick_adcp   -------------------------
2016-03-12 04:10:02,451 INFO     quick_adcp   step 15: nav steps: make reflayer plots
2016-03-12 04:10:02,451 INFO     quick_adcp   navstep 6
2016-03-12 04:10:02,663 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:02,663 INFO     quick_adcp   step 10: find profile flags 

2016-03-12 04:10:02,684 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:02,684 INFO     quick_adcp   step 11: apply editing 

2016-03-12 04:10:02,696 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:02,696 INFO     quick_adcp   step 12: run calibration steps 

2016-03-12 04:10:02,721 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:02,721 INFO     quick_adcp   step 13: extract and plot temperature 

2016-03-12 04:10:02,854 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:02,854 INFO     quick_adcp   step 14: extract and plot number of pings per ensemble 

2016-03-12 04:10:02,983 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:02,983 INFO     quick_adcp   step 15: extract matlab "allbins" 

2016-03-12 04:10:03,008 INFO     quick_adcp   ---------------------------------------------
2016-03-12 04:10:03,008 INFO     quick_adcp   writing "cruise_info.txt"