2018-10-31 10:42:59,920 INFO     quick_adcp   importing numpy version 1.8.2
2018-10-31 10:42:59,932 INFO     quick_adcp   importing matplotlib version 1.4.3
2018-10-31 10:43:00,034 INFO     quick_adcp   =====================================================
2018-10-31 10:43:00,034 INFO     quick_adcp   =====================================================
2018-10-31 10:43:00,034 INFO     quick_adcp   command line was: /usr/local/currents/bin/run_quick.py -d wh300
2018-10-31 10:43:00,034 INFO     quick_adcp   cwd is /home/data/EX1811/proc/wh300
about to run these steps:
 - write_clearflags
 - scandata
 - avg_and_load
 - codaseditsetup
 - setflags
 - getnav
 - lst_hdg
 - plot_headcorr
 - navsteps
 - find_pflags
 - apply_edit
 - navsteps
 - lst_temp
 - plot_temp
 - lst_npings
 - calib
 - matfiles
 - adcpsect
 - refabs
 - smoothnav
 - putnav
 - refplots
 - find_pflags
 - codaseditsetup
2018-10-31 10:43:00,036 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,036 INFO     quick_adcp   step 1: set up files in "edit" directory 

2018-10-31 10:43:00,036 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,036 INFO     quick_adcp   step 2: scan files for time range

2018-10-31 10:43:00,041 INFO     quick_adcp   looking for database with adcpdb/a_ex*.blk
2018-10-31 10:43:00,041 INFO     quick_adcp   database found: listing blocks
2018-10-31 10:43:00,048 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,048 INFO     quick_adcp   step 3: generate averaged data...
2018-10-31 10:43:00,070 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,070 INFO     quick_adcp   step 4: load averaged data (to database)
2018-10-31 10:43:00,089 INFO     quick_adcp   database time range:
2018-10-31 10:43:00,089 INFO     quick_adcp   2018/10/30  14:16:07 to 2018/10/31  10:36:44
2018-10-31 10:43:00,089 INFO     quick_adcp   (302.594525 to 303.442176)
2018-10-31 10:43:00,094 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,094 INFO     quick_adcp   step 5: set up files for codas editing (gautoedit.py)

2018-10-31 10:43:00,094 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,094 INFO     quick_adcp   step 6: run setflags?

2018-10-31 10:43:00,098 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,098 INFO     quick_adcp   step 7: get navigation

2018-10-31 10:43:00,345 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,345 INFO     quick_adcp   step 8: list heading

2018-10-31 10:43:00,350 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,350 INFO     quick_adcp   step 9: plot heading correction

2018-10-31 10:43:00,553 INFO     quick_adcp   
-------------------------
2018-10-31 10:43:00,553 INFO     quick_adcp   ---- running navsteps ---
2018-10-31 10:43:00,553 INFO     quick_adcp   -------------------------
2018-10-31 10:43:00,553 INFO     quick_adcp   step 10: nav steps: run adcpsect
2018-10-31 10:43:00,553 INFO     quick_adcp   navstep 1
2018-10-31 10:43:00,559 INFO     quick_adcp   -------------------------
2018-10-31 10:43:00,559 INFO     quick_adcp   step 11: nav steps: run refabs
2018-10-31 10:43:00,559 INFO     quick_adcp   navstep 2
2018-10-31 10:43:00,565 INFO     quick_adcp   -------------------------
2018-10-31 10:43:00,565 INFO     quick_adcp   step 12: nav steps: run smoothr for plots
2018-10-31 10:43:00,565 INFO     quick_adcp   navstep 3
2018-10-31 10:43:00,576 INFO     quick_adcp   -------------------------
2018-10-31 10:43:00,576 INFO     quick_adcp   step 13: nav steps: smooth navigation for velocities
2018-10-31 10:43:00,576 INFO     quick_adcp   navstep 4
2018-10-31 10:43:00,590 INFO     quick_adcp   -------------------------
2018-10-31 10:43:00,590 INFO     quick_adcp   step 14: nav steps: put positions and uvship from refsm into codasdb 
2018-10-31 10:43:00,590 INFO     quick_adcp   navstep 5
2018-10-31 10:43:00,787 INFO     quick_adcp   -------------------------
2018-10-31 10:43:00,787 INFO     quick_adcp   step 15: nav steps: make reflayer plots
2018-10-31 10:43:00,787 INFO     quick_adcp   navstep 6
2018-10-31 10:43:00,979 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,979 INFO     quick_adcp   step 10: find profile flags 

2018-10-31 10:43:00,993 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:00,993 INFO     quick_adcp   step 11: apply editing 

2018-10-31 10:43:01,009 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:01,009 INFO     quick_adcp   step 12: run calibration steps 

2018-10-31 10:43:01,390 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:01,390 INFO     quick_adcp   step 13: extract and plot temperature 

2018-10-31 10:43:01,538 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:01,538 INFO     quick_adcp   step 14: extract and plot number of pings per ensemble 

2018-10-31 10:43:01,635 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:01,635 INFO     quick_adcp   step 15: extract matlab "allbins" 

2018-10-31 10:43:01,682 INFO     quick_adcp   ---------------------------------------------
2018-10-31 10:43:01,682 INFO     quick_adcp   writing "cruise_info.txt"